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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183351970
OLWZ01001704
235146
Actinomycetota
CGT
Thr
>WENV183352648
OLWZ01066725
119475
Actinomycetota
TAA
Leu
>WENV183352207
OLWZ01007342
235153
Actinomycetota
CCT
Arg
>WENV183352264
OLWZ01010049
144589
Actinomycetota
ACG
Arg
>WENV183352387
OLWZ01018334
144600
Actinomycetota
TGG
Pro
>WENV183352170
OLWZ01006020
235092
Actinomycetota
CCG
Arg
>WENV183352166
OLWZ01005956
411601
Actinomycetota
CCC
Gly
>WENV183352650
OLWZ01067092
144826
Actinomycetota
GGG
Pro
>WENV183352599
OLWZ01054270
338239
Actinomycetota
TTC
Glu
>WENV183352470
OLWZ01029016
16219
Actinomycetota
GCT
Ser
>WENV183352510
OLWZ01033526
44929
Actinomycetota
GGA
Ser
>WENV183352022
OLWZ01002572
235174
Actinomycetota
TGC
Ala
>WENV183352336
OLWZ01014371
235101
Actinomycetota
TTT
Lys
>WENV183352347
OLWZ01015450
121510
Actinomycetota
TAA
Leu
>WENV183352585
OLWZ01050434
153948
Actinomycetota
GGG
Pro
>WENV183352359
OLWZ01016057
235199
Actinomycetota
CAC
Val
>WENV183352217
OLWZ01007725
44862
Actinomycetota
CGA
Ser
>WENV183352434
OLWZ01022760
16223
Actinomycetota
GAG
Leu
>WENV183352136
OLWZ01005304
144700
Actinomycetota
CAT
Met
>WENV183352392
OLWZ01018596
238473
Actinomycetota
GTG
His
>WENV183352639
OLWZ01062167
144636
Actinomycetota
GAT
Ile
>WENV183352162
OLWZ01005880
243671
Actinomycetota
CTC
Glu
>WENV183352163
OLWZ01005880
338148
Actinomycetota
CTG
Gln
>WENV183352462
OLWZ01027598
144825
Actinomycetota
CAT
Met
>WENV183352376
OLWZ01017062
411554
Actinomycetota
CCC
Gly
>WENV183351969
OLWZ01001704
113601
Actinomycetota
TAG
Leu
>WENV183352054
OLWZ01003120
144595
Actinomycetota
CAA
Leu
>WENV183352547
OLWZ01040406
240009
Actinomycetota
GGC
Ala
>WENV183352458
OLWZ01027490
414234
Actinomycetota
CTG
Gln
>WENV183351968
OLWZ01001704
235121
Actinomycetota
CGT
Thr
>WENV183352483
OLWZ01030663
235121
Actinomycetota
CGT
Thr
>WENV183352453
OLWZ01026226
80622
Actinomycetota
CAG
Leu
>WENV183352171
OLWZ01006079
147734
Actinomycetota
GTC
Asp
>WENV183352429
OLWZ01022224
235173
Actinomycetota
GGC
Ala
>WENV183352274
OLWZ01010233
243162
Actinomycetota
GTT
Asn
>WENV183352090
OLWZ01004376
144660
Actinomycetota
TAC
Val
>WENV183352135
OLWZ01005304
95593
Actinomycetota
>WENV183352141
OLWZ01005380
144823
Actinomycetota
TCT
Arg
>WENV183352386
OLWZ01018294
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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