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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183351563
OLWZ01000005
235097
Bacteroidota
TTT
Lys
>WENV183351732
OLWZ01000277
235097
Bacteroidota
TTT
Lys
>WENV183351947
OLWZ01001474
235102
Bacteroidota
CGT
Thr
>WENV183352480
OLWZ01030061
237796
Bacteroidota
CGT
Thr
>WENV183352319
OLWZ01013595
144657
Bacteroidota
CGG
Pro
>WENV183352314
OLWZ01013396
243025
Bacteroidota
CAT
Met
>WENV183352553
OLWZ01041492
153993
Bacteroidota
GAT
Ile
>WENV183351946
OLWZ01001447
339341
Bacteroidota
GGT
Thr
>WENV183352562
OLWZ01044486
343138
Bacteroidota
CCT
Arg
>WENV183352159
OLWZ01005765
58715
Bacteroidota
GAG
Leu
>WENV183352028
OLWZ01002719
46165
Bacteroidota
TGA
Ser
>WENV183352373
OLWZ01016885
338486
Bacteroidota
CAT
Met
>WENV183351637
OLWZ01000098
415410
Bacteroidota
TTG
Gln
>WENV183352167
OLWZ01005980
415410
Bacteroidota
TTG
Gln
>WENV183351828
OLWZ01000652
411543
Bacteroidota
CTG
Gln
>WENV183352158
OLWZ01005765
59689
Bacteroidota
CAG
Leu
>WENV183352596
OLWZ01053931
412479
Bacteroidota
TTG
Gln
>WENV183351698
OLWZ01000208
80835
Bacteroidota
GTA
Tyr
>WENV183351949
OLWZ01001483
80835
Bacteroidota
GTA
Tyr
>WENV183352071
OLWZ01003728
237247
Bacteroidota
TTT
Lys
>WENV183351608
OLWZ01000052
338124
Bacteroidota
CCG
Arg
>WENV183352226
OLWZ01008083
238121
Bacteroidota
CTT
Lys
>WENV183351847
OLWZ01000772
338132
Bacteroidota
GCA
Cys
>WENV183351870
OLWZ01000861
338132
Bacteroidota
GCA
Cys
>WENV183352257
OLWZ01009353
338132
Bacteroidota
GCA
Cys
>WENV183352328
OLWZ01014102
45423
Bacteroidota
TGA
Ser
>WENV183352396
OLWZ01019159
37076
Bacteroidota
TAA
Leu
>WENV183352197
OLWZ01007007
58714
Bacteroidota
CAA
Leu
>WENV183351644
OLWZ01000123
144933
Bacteroidota
TCT
Arg
>WENV183352303
OLWZ01012458
144933
Bacteroidota
TCT
Arg
>WENV183351604
OLWZ01000043
144656
Bacteroidota
GTG
His
>WENV183351626
OLWZ01000086
235207
Bacteroidota
CAT
Met
>WENV183351958
OLWZ01001528
144659
Bacteroidota
GTG
His
>WENV183352145
OLWZ01005473
144659
Bacteroidota
GTG
His
>WENV183352320
OLWZ01013595
235180
Bacteroidota
CCA
Trp
>WENV183352329
OLWZ01014110
144596
Bacteroidota
GGC
Ala
>WENV183351863
OLWZ01000836
80607
Bacteroidota
GTA
Tyr
>WENV183352005
OLWZ01002370
344769
Bacteroidota
CTC
Glu
>WENV183352088
OLWZ01004195
16999
Bacteroidota
GGA
Ser
>WENV183351945
OLWZ01001447
80614
Bacteroidota
>WENV183352195
OLWZ01006816
154643
Bacteroidota
CAT
Met
>WENV183351731
OLWZ01000274
144590
Bacteroidota
GTT
Asn
>WENV183351696
OLWZ01000203
95559
Bacteroidota
TAG
Leu
>WENV183351713
OLWZ01000239
144655
Bacteroidota
GGC
Ala
>WENV183351824
OLWZ01000646
338164
Bacteroidota
TTC
Glu
>WENV183351922
OLWZ01001203
95875
Bacteroidota
TAG
Leu
>WENV183351667
OLWZ01000156
44852
Bacteroidota
TAA
Leu
>WENV183351940
OLWZ01001369
147439
Bacteroidota
TCT
Arg
>WENV183352219
OLWZ01007728
342206
Bacteroidota
TTC
Glu
>WENV183352015
OLWZ01002431
23696
Bacteroidota
GCT
Ser
>WENV183352092
OLWZ01004428
59498
Bacteroidota
GAG
Leu
>WENV183351729
OLWZ01000268
16224
Bacteroidota
GGA
Ser
>WENV183352512
OLWZ01034601
151960
Bacteroidota
GGC
Ala
>WENV183351587
OLWZ01000022
16220
Bacteroidota
GGA
Ser
>WENV183351972
OLWZ01001764
338125
Bacteroidota
CCT
Arg
>WENV183351935
OLWZ01001321
235129
Bacteroidota
GCC
Gly
>WENV183352014
OLWZ01002414
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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