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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
58 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183362847
OLXK01039144
95987
Bacteroidota
CAA
Leu
>WENV183362816
OLXK01032753
339412
Bacteroidota
GGT
Thr
>WENV183362204
OLXK01003037
235102
Bacteroidota
CGT
Thr
>WENV183362844
OLXK01038072
144657
Bacteroidota
CGG
Pro
>WENV183361319
OLXK01000004
243025
Bacteroidota
CAT
Met
>WENV183362138
OLXK01002246
338155
Bacteroidota
CTC
Glu
>WENV183362939
OLXK01054146
153993
Bacteroidota
GAT
Ile
>WENV183362407
OLXK01006834
343138
Bacteroidota
CCT
Arg
>WENV183362747
OLXK01025978
338486
Bacteroidota
CAT
Met
>WENV183361631
OLXK01000289
415410
Bacteroidota
TTG
Gln
>WENV183362121
OLXK01002114
415410
Bacteroidota
TTG
Gln
>WENV183362908
OLXK01047187
237797
Bacteroidota
CCA
Trp
>WENV183362528
OLXK01011360
59689
Bacteroidota
CAG
Leu
>WENV183362139
OLXK01002298
20893
Bacteroidota
GGA
Ser
>WENV183362841
OLXK01037599
127221
Bacteroidota
TAC
Val
>WENV183362646
OLXK01016865
344692
Bacteroidota
GGT
Thr
>WENV183361428
OLXK01000061
145504
Bacteroidota
TGT
Thr
>WENV183362025
OLXK01001431
338124
Bacteroidota
CCG
Arg
>WENV183361783
OLXK01000589
338132
Bacteroidota
GCA
Cys
>WENV183363014
OLXK01066123
37076
Bacteroidota
TAA
Leu
>WENV183362280
OLXK01004401
58714
Bacteroidota
CAA
Leu
>WENV183361603
OLXK01000260
235165
Bacteroidota
CCA
Trp
>WENV183362109
OLXK01002002
301449
Bacteroidota
CGG
Pro
>WENV183361822
OLXK01000672
144933
Bacteroidota
TCT
Arg
>WENV183362312
OLXK01004808
144656
Bacteroidota
GTG
His
>WENV183362420
OLXK01007212
235207
Bacteroidota
CAT
Met
>WENV183362532
OLXK01011731
235180
Bacteroidota
CCA
Trp
>WENV183361497
OLXK01000127
144596
Bacteroidota
GGC
Ala
>WENV183361673
OLXK01000356
80607
Bacteroidota
GTA
Tyr
>WENV183362660
OLXK01017652
80614
Bacteroidota
>WENV183361736
OLXK01000485
52358
Bacteroidota
TGA
Ser
>WENV183361797
OLXK01000607
52358
Bacteroidota
TGA
Ser
>WENV183362045
OLXK01001546
154643
Bacteroidota
CAT
Met
>WENV183362657
OLXK01017588
154643
Bacteroidota
CAT
Met
>WENV183361864
OLXK01000806
95559
Bacteroidota
TAG
Leu
>WENV183361841
OLXK01000753
419272
Bacteroidota
CTG
Gln
>WENV183362743
OLXK01024992
144655
Bacteroidota
GGC
Ala
>WENV183361520
OLXK01000142
144639
Bacteroidota
GGC
Ala
>WENV183362451
OLXK01007986
338164
Bacteroidota
TTC
Glu
>WENV183362324
OLXK01005052
95875
Bacteroidota
TAG
Leu
>WENV183361728
OLXK01000477
44852
Bacteroidota
TAA
Leu
>WENV183363061
OLXK01079780
147439
Bacteroidota
TCT
Arg
>WENV183362758
OLXK01027421
280513
Bacteroidota
TTT
Lys
>WENV183361458
OLXK01000086
150485
Bacteroidota
GTT
Asn
>WENV183362201
OLXK01002998
411550
Bacteroidota
CTG
Gln
>WENV183362829
OLXK01035388
338165
Bacteroidota
GGT
Thr
>WENV183361813
OLXK01000646
425638
Bacteroidota
CTG
Gln
>WENV183362056
OLXK01001613
353927
Bacteroidota
TTC
Glu
>WENV183361646
OLXK01000320
353927
Bacteroidota
TTC
Glu
>WENV183362359
OLXK01005945
185921
Bacteroidota
GTC
Asp
>WENV183362982
OLXK01061361
146530
Bacteroidota
TGT
Thr
>WENV183362137
OLXK01002246
23696
Bacteroidota
GCT
Ser
>WENV183362785
OLXK01029819
23696
Bacteroidota
GCT
Ser
>WENV183361564
OLXK01000195
414426
Bacteroidota
CTG
Gln
>WENV183362020
OLXK01001424
16224
Bacteroidota
GGA
Ser
>WENV183361889
OLXK01000829
16220
Bacteroidota
GGA
Ser
>WENV183361820
OLXK01000667
338125
Bacteroidota
CCT
Arg
>WENV183362246
OLXK01003711
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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