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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183365889
OLXO01000002
119661
Verrucomicrobiota
CAA
Leu
>WENV183365888
OLXO01000001
155256
Verrucomicrobiota
TCT
Arg
>WENV183365887
OLXO01000001
246701
Verrucomicrobiota
TTT
Lys
>WENV183365919
OLXO01000035
345141
Verrucomicrobiota
TTG
Gln
>WENV183365949
OLXO01000077
345133
Verrucomicrobiota
GAC
Val
>WENV183365928
OLXO01000052
82054
Verrucomicrobiota
GTA
Tyr
>WENV183365952
OLXO01000087
246677
Verrucomicrobiota
CTT
Lys
>WENV183365953
OLXO01000087
246677
Verrucomicrobiota
CTT
Lys
>WENV183366413
OLXO01020482
344844
Verrucomicrobiota
GCA
Cys
>WENV183365938
OLXO01000060
155264
Verrucomicrobiota
GGG
Pro
>WENV183366069
OLXO01000392
344845
Verrucomicrobiota
CTG
Gln
>WENV183365901
OLXO01000014
414625
Verrucomicrobiota
CCC
Gly
>WENV183365939
OLXO01000062
46246
Verrucomicrobiota
TGA
Ser
>WENV183365893
OLXO01000007
97755
Verrucomicrobiota
TAG
Leu
>WENV183365943
OLXO01000067
347038
Verrucomicrobiota
GCC
Gly
>WENV183365959
OLXO01000097
246687
Verrucomicrobiota
CGC
Ala
>WENV183365903
OLXO01000014
419909
Verrucomicrobiota
TCC
Gly
>WENV183365894
OLXO01000010
344841
Verrucomicrobiota
CAC
Val
>WENV183366029
OLXO01000241
60880
Verrucomicrobiota
CAG
Leu
>WENV183365977
OLXO01000131
82056
Verrucomicrobiota
TAA
Leu
>WENV183365951
OLXO01000087
344842
Verrucomicrobiota
CGT
Thr
>WENV183365917
OLXO01000033
170105
Verrucomicrobiota
CAT
Met
>WENV183366036
OLXO01000267
345123
Verrucomicrobiota
TGT
Thr
>WENV183365890
OLXO01000002
345110
Verrucomicrobiota
CCT
Arg
>WENV183366105
OLXO01000666
344839
Verrucomicrobiota
GTG
His
>WENV183366055
OLXO01000344
7274
Verrucomicrobiota
CGA
Ser
>WENV183365978
OLXO01000131
246260
Verrucomicrobiota
>WENV183365954
OLXO01000087
155268
Verrucomicrobiota
CGG
Pro
>WENV183365921
OLXO01000038
82181
Verrucomicrobiota
AAG
Leu
>WENV183365936
OLXO01000060
246728
Verrucomicrobiota
GAA
Phe
>WENV183365979
OLXO01000131
7256
Verrucomicrobiota
GCT
Ser
>WENV183365940
OLXO01000062
345115
Verrucomicrobiota
CAT
Met
>WENV183365947
OLXO01000073
345119
Verrucomicrobiota
TAC
Val
>WENV183365927
OLXO01000052
345124
Verrucomicrobiota
GTT
Asn
>WENV183365900
OLXO01000013
17023
Verrucomicrobiota
GGA
Ser
>WENV183365902
OLXO01000014
345142
Verrucomicrobiota
CCG
Arg
>WENV183366106
OLXO01000666
246709
Verrucomicrobiota
CAT
Met
>WENV183365937
OLXO01000060
154693
Verrucomicrobiota
TGG
Pro
>WENV183365980
OLXO01000132
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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