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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183372764
OLXX01000235
235102
Bacteroidota
CGT
Thr
>WENV183372824
OLXX01000756
243025
Bacteroidota
CAT
Met
>WENV183372858
OLXX01001324
338155
Bacteroidota
CTC
Glu
>WENV183373071
OLXX01023669
343138
Bacteroidota
CCT
Arg
>WENV183373005
OLXX01010548
338486
Bacteroidota
CAT
Met
>WENV183372724
OLXX01000076
415410
Bacteroidota
TTG
Gln
>WENV183372731
OLXX01000085
415410
Bacteroidota
TTG
Gln
>WENV183372795
OLXX01000478
80835
Bacteroidota
GTA
Tyr
>WENV183372931
OLXX01003769
145504
Bacteroidota
TGT
Thr
>WENV183372691
OLXX01000016
338124
Bacteroidota
CCG
Arg
>WENV183372722
OLXX01000071
126641
Bacteroidota
TAC
Val
>WENV183372775
OLXX01000283
126641
Bacteroidota
TAC
Val
>WENV183372808
OLXX01000547
338132
Bacteroidota
GCA
Cys
>WENV183372714
OLXX01000044
338132
Bacteroidota
GCA
Cys
>WENV183372992
OLXX01008636
58714
Bacteroidota
CAA
Leu
>WENV183372995
OLXX01009015
235165
Bacteroidota
CCA
Trp
>WENV183372817
OLXX01000693
280660
Bacteroidota
CCA
Trp
>WENV183372813
OLXX01000636
144933
Bacteroidota
TCT
Arg
>WENV183372706
OLXX01000038
144656
Bacteroidota
GTG
His
>WENV183372885
OLXX01001732
235207
Bacteroidota
CAT
Met
>WENV183373037
OLXX01015778
144596
Bacteroidota
GGC
Ala
>WENV183372743
OLXX01000150
80607
Bacteroidota
GTA
Tyr
>WENV183372854
OLXX01001299
154643
Bacteroidota
CAT
Met
>WENV183372717
OLXX01000062
144590
Bacteroidota
GTT
Asn
>WENV183372730
OLXX01000083
95559
Bacteroidota
TAG
Leu
>WENV183372698
OLXX01000028
419272
Bacteroidota
CTG
Gln
>WENV183372694
OLXX01000022
144655
Bacteroidota
GGC
Ala
>WENV183372761
OLXX01000205
44852
Bacteroidota
TAA
Leu
>WENV183373034
OLXX01015150
147439
Bacteroidota
TCT
Arg
>WENV183372705
OLXX01000038
50727
Bacteroidota
TGA
Ser
>WENV183372758
OLXX01000198
50727
Bacteroidota
TGA
Ser
>WENV183372812
OLXX01000618
50727
Bacteroidota
TGA
Ser
>WENV183372816
OLXX01000651
50727
Bacteroidota
TGA
Ser
>WENV183372699
OLXX01000028
132360
Bacteroidota
GGG
Pro
>WENV183372876
OLXX01001567
19317
Bacteroidota
GGA
Ser
>WENV183372895
OLXX01002015
353927
Bacteroidota
TTC
Glu
>WENV183372948
OLXX01004999
185921
Bacteroidota
GTC
Asp
>WENV183372707
OLXX01000038
16224
Bacteroidota
GGA
Ser
>WENV183372723
OLXX01000075
16220
Bacteroidota
GGA
Ser
>WENV183372832
OLXX01000868
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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