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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183382158
OLYL01000002
119661
Verrucomicrobiota
CAA
Leu
>WENV183382562
OLYL01003617
155256
Verrucomicrobiota
TCT
Arg
>WENV183382308
OLYL01000181
246701
Verrucomicrobiota
TTT
Lys
>WENV183382204
OLYL01000038
345141
Verrucomicrobiota
TTG
Gln
>WENV183382198
OLYL01000029
345133
Verrucomicrobiota
GAC
Val
>WENV183382190
OLYL01000020
82054
Verrucomicrobiota
GTA
Tyr
>WENV183382318
OLYL01000215
246677
Verrucomicrobiota
CTT
Lys
>WENV183382455
OLYL01001428
344844
Verrucomicrobiota
GCA
Cys
>WENV183382270
OLYL01000134
155264
Verrucomicrobiota
GGG
Pro
>WENV183382391
OLYL01000688
344845
Verrucomicrobiota
CTG
Gln
>WENV183382197
OLYL01000029
128202
Verrucomicrobiota
GTC
Asp
>WENV183382226
OLYL01000060
128202
Verrucomicrobiota
GTC
Asp
>WENV183382290
OLYL01000149
414625
Verrucomicrobiota
CCC
Gly
>WENV183382180
OLYL01000014
97755
Verrucomicrobiota
TAG
Leu
>WENV183382227
OLYL01000062
246700
Verrucomicrobiota
TTC
Glu
>WENV183382228
OLYL01000062
246700
Verrucomicrobiota
TTC
Glu
>WENV183382358
OLYL01000430
246700
Verrucomicrobiota
TTC
Glu
>WENV183382247
OLYL01000093
347038
Verrucomicrobiota
GCC
Gly
>WENV183382494
OLYL01001911
347038
Verrucomicrobiota
GCC
Gly
>WENV183382238
OLYL01000077
246687
Verrucomicrobiota
CGC
Ala
>WENV183382289
OLYL01000146
344841
Verrucomicrobiota
CAC
Val
>WENV183382440
OLYL01001263
60880
Verrucomicrobiota
CAG
Leu
>WENV183382159
OLYL01000002
82056
Verrucomicrobiota
TAA
Leu
>WENV183382317
OLYL01000215
344842
Verrucomicrobiota
CGT
Thr
>WENV183382231
OLYL01000065
345123
Verrucomicrobiota
TGT
Thr
>WENV183382181
OLYL01000014
345110
Verrucomicrobiota
CCT
Arg
>WENV183382359
OLYL01000430
344839
Verrucomicrobiota
GTG
His
>WENV183382172
OLYL01000008
7274
Verrucomicrobiota
CGA
Ser
>WENV183382160
OLYL01000002
246260
Verrucomicrobiota
>WENV183382377
OLYL01000568
155268
Verrucomicrobiota
CGG
Pro
>WENV183382261
OLYL01000117
82181
Verrucomicrobiota
AAG
Leu
>WENV183382271
OLYL01000134
246728
Verrucomicrobiota
GAA
Phe
>WENV183382161
OLYL01000002
7256
Verrucomicrobiota
GCT
Ser
>WENV183382221
OLYL01000048
345115
Verrucomicrobiota
CAT
Met
>WENV183382220
OLYL01000047
345119
Verrucomicrobiota
TAC
Val
>WENV183382189
OLYL01000020
345124
Verrucomicrobiota
GTT
Asn
>WENV183382469
OLYL01001624
17023
Verrucomicrobiota
GGA
Ser
>WENV183382230
OLYL01000065
345142
Verrucomicrobiota
CCG
Arg
>WENV183382360
OLYL01000430
246709
Verrucomicrobiota
CAT
Met
>WENV183382272
OLYL01000134
154693
Verrucomicrobiota
TGG
Pro
>WENV183382182
OLYL01000015
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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