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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183383897
OLYN01000139
24650
Bacillota
TAA
Leu
>WENV183384895
OLYN01018942
24650
Bacillota
TAA
Leu
>WENV183384875
OLYN01018068
196621
Bacillota
GTC
Asp
>WENV183384684
OLYN01010336
155958
Bacillota
GAT
Ile
>WENV183384468
OLYN01004451
309417
Bacillota
GGC
Ala
>WENV183385298
OLYN01061253
156958
Bacillota
GAT
Ile
>WENV183384105
OLYN01000840
37213
Bacillota
TGA
Ser
>WENV183384406
OLYN01003292
144612
Bacillota
TCT
Arg
>WENV183384672
OLYN01009868
154063
Bacillota
CGG
Pro
>WENV183383814
OLYN01000037
267649
Bacillota
TAC
Val
>WENV183385097
OLYN01033536
347827
Bacillota
TTC
Glu
>WENV183384785
OLYN01013550
307003
Bacillota
TGC
Ala
>WENV183384853
OLYN01017119
59312
Bacillota
CAG
Leu
>WENV183384006
OLYN01000397
338147
Bacillota
CTC
Glu
>WENV183384908
OLYN01019419
235150
Bacillota
TGC
Ala
>WENV183383902
OLYN01000150
429429
Bacillota
CCA
Trp
>WENV183384500
OLYN01005222
44859
Bacillota
AAG
Leu
>WENV183384219
OLYN01001628
11034
Bacillota
GGA
Ser
>WENV183384332
OLYN01002519
274189
Bacillota
TGT
Thr
>WENV183385238
OLYN01049907
173314
Bacillota
GAT
Ile
>WENV183384477
OLYN01004727
338149
Bacillota
CTC
Glu
>WENV183384160
OLYN01001137
155089
Bacillota
CAT
Met
>WENV183383841
OLYN01000061
287000
Bacillota
GTT
Asn
>WENV183384263
OLYN01001982
169968
Bacillota
CAT
Met
>WENV183384278
OLYN01002058
152149
Bacillota
GTG
His
>WENV183384169
OLYN01001178
411547
Bacillota
CTG
Gln
>WENV183384188
OLYN01001348
412387
Bacillota
GCA
Cys
>WENV183384827
OLYN01015916
235095
Bacillota
GGT
Thr
>WENV183384876
OLYN01018068
235095
Bacillota
GGT
Thr
>WENV183383935
OLYN01000230
344183
Bacillota
CTG
Gln
>WENV183384776
OLYN01013224
411549
Bacillota
TTG
Gln
>WENV183384046
OLYN01000537
235142
Bacillota
CTT
Lys
>WENV183384782
OLYN01013394
148188
Bacillota
CCG
Arg
>WENV183384700
OLYN01010823
80612
Bacillota
GTA
Tyr
>WENV183384109
OLYN01000860
163943
Bacillota
GTC
Asp
>WENV183384769
OLYN01012928
298620
Bacillota
CAT
Met
>WENV183384294
OLYN01002118
235124
Bacillota
TGG
Pro
>WENV183384476
OLYN01004718
338129
Bacillota
TGT
Thr
>WENV183384323
OLYN01002423
157838
Bacillota
GTC
Asp
>WENV183384349
OLYN01002790
144583
Bacillota
ACG
Arg
>WENV183384697
OLYN01010761
247734
Bacillota
TGC
Ala
>WENV183384312
OLYN01002354
144621
Bacillota
GTT
Asn
>WENV183384478
OLYN01004727
144621
Bacillota
GTT
Asn
>WENV183384897
OLYN01018973
58712
Bacillota
CAG
Leu
>WENV183384167
OLYN01001170
245296
Bacillota
CCC
Gly
>WENV183385237
OLYN01049907
299139
Bacillota
TGC
Ala
>WENV183384595
OLYN01007758
95563
Bacillota
GTA
Tyr
>WENV183384096
OLYN01000807
338127
Bacillota
TTG
Gln
>WENV183384759
OLYN01012417
292012
Bacillota
TGC
Ala
>WENV183384280
OLYN01002060
338128
Bacillota
TTC
Glu
>WENV183384841
OLYN01016571
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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