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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183395126
OLZH01001275
235097
Bacteroidota
TTT
Lys
>WENV183395273
OLZH01005052
235097
Bacteroidota
TTT
Lys
>WENV183395075
OLZH01000671
95987
Bacteroidota
CAA
Leu
>WENV183394850
OLZH01000006
339412
Bacteroidota
GGT
Thr
>WENV183395369
OLZH01009294
235102
Bacteroidota
CGT
Thr
>WENV183395431
OLZH01015874
144657
Bacteroidota
CGG
Pro
>WENV183395362
OLZH01008759
126966
Bacteroidota
TAC
Val
>WENV183395019
OLZH01000321
97336
Bacteroidota
CAG
Leu
>WENV183395411
OLZH01012967
343138
Bacteroidota
CCT
Arg
>WENV183395370
OLZH01009454
24174
Bacteroidota
GCT
Ser
>WENV183395337
OLZH01007282
415410
Bacteroidota
TTG
Gln
>WENV183395404
OLZH01011901
411543
Bacteroidota
CTG
Gln
>WENV183394966
OLZH01000140
412479
Bacteroidota
TTG
Gln
>WENV183395270
OLZH01004764
155123
Bacteroidota
GTT
Asn
>WENV183395237
OLZH01003534
338124
Bacteroidota
CCG
Arg
>WENV183395175
OLZH01002203
338132
Bacteroidota
GCA
Cys
>WENV183395061
OLZH01000552
37076
Bacteroidota
TAA
Leu
>WENV183395492
OLZH01023570
144933
Bacteroidota
TCT
Arg
>WENV183395385
OLZH01010242
144656
Bacteroidota
GTG
His
>WENV183395197
OLZH01002473
235207
Bacteroidota
CAT
Met
>WENV183395541
OLZH01031608
235180
Bacteroidota
CCA
Trp
>WENV183395059
OLZH01000546
80607
Bacteroidota
GTA
Tyr
>WENV183394948
OLZH01000095
344769
Bacteroidota
CTC
Glu
>WENV183394949
OLZH01000095
344769
Bacteroidota
CTC
Glu
>WENV183394852
OLZH01000006
147148
Bacteroidota
CAT
Met
>WENV183395595
OLZH01043201
154643
Bacteroidota
CAT
Met
>WENV183395358
OLZH01008310
144590
Bacteroidota
GTT
Asn
>WENV183395168
OLZH01001879
95559
Bacteroidota
TAG
Leu
>WENV183395009
OLZH01000297
419272
Bacteroidota
CTG
Gln
>WENV183395228
OLZH01003349
419272
Bacteroidota
CTG
Gln
>WENV183395240
OLZH01003565
419272
Bacteroidota
CTG
Gln
>WENV183395145
OLZH01001484
144655
Bacteroidota
GGC
Ala
>WENV183395419
OLZH01014232
338164
Bacteroidota
TTC
Glu
>WENV183395532
OLZH01030710
95875
Bacteroidota
TAG
Leu
>WENV183395142
OLZH01001453
280469
Bacteroidota
CGT
Thr
>WENV183394945
OLZH01000095
167013
Bacteroidota
TGG
Pro
>WENV183394946
OLZH01000095
167013
Bacteroidota
TGG
Pro
>WENV183395191
OLZH01002364
44852
Bacteroidota
TAA
Leu
>WENV183395508
OLZH01026636
150485
Bacteroidota
GTT
Asn
>WENV183395509
OLZH01026636
150485
Bacteroidota
GTT
Asn
>WENV183394994
OLZH01000216
50727
Bacteroidota
TGA
Ser
>WENV183395107
OLZH01000909
132360
Bacteroidota
GGG
Pro
>WENV183395230
OLZH01003461
132360
Bacteroidota
GGG
Pro
>WENV183395543
OLZH01032471
353927
Bacteroidota
TTC
Glu
>WENV183395285
OLZH01005405
16224
Bacteroidota
GGA
Ser
>WENV183395125
OLZH01001267
16220
Bacteroidota
GGA
Ser
>WENV183395136
OLZH01001371
338125
Bacteroidota
CCT
Arg
>WENV183395338
OLZH01007323
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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