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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183397626
OLZL01000417
119661
Verrucomicrobiota
CAA
Leu
>WENV183397612
OLZL01000212
155256
Verrucomicrobiota
TCT
Arg
>WENV183397592
OLZL01000049
246701
Verrucomicrobiota
TTT
Lys
>WENV183397633
OLZL01000565
345141
Verrucomicrobiota
TTG
Gln
>WENV183397640
OLZL01000905
345133
Verrucomicrobiota
GAC
Val
>WENV183397618
OLZL01000257
82054
Verrucomicrobiota
GTA
Tyr
>WENV183397611
OLZL01000202
246677
Verrucomicrobiota
CTT
Lys
>WENV183397642
OLZL01001246
344844
Verrucomicrobiota
GCA
Cys
>WENV183397587
OLZL01000023
155264
Verrucomicrobiota
GGG
Pro
>WENV183397638
OLZL01000834
344845
Verrucomicrobiota
CTG
Gln
>WENV183397625
OLZL01000370
128202
Verrucomicrobiota
GTC
Asp
>WENV183397603
OLZL01000136
414625
Verrucomicrobiota
CCC
Gly
>WENV183397589
OLZL01000036
46246
Verrucomicrobiota
TGA
Ser
>WENV183397623
OLZL01000318
97755
Verrucomicrobiota
TAG
Leu
>WENV183397602
OLZL01000127
246700
Verrucomicrobiota
TTC
Glu
>WENV183397613
OLZL01000224
246687
Verrucomicrobiota
CGC
Ala
>WENV183397624
OLZL01000332
344841
Verrucomicrobiota
CAC
Val
>WENV183397598
OLZL01000079
60880
Verrucomicrobiota
CAG
Leu
>WENV183397650
OLZL01002177
82056
Verrucomicrobiota
TAA
Leu
>WENV183397610
OLZL01000202
344842
Verrucomicrobiota
CGT
Thr
>WENV183397629
OLZL01000547
170105
Verrucomicrobiota
CAT
Met
>WENV183397601
OLZL01000118
287733
Verrucomicrobiota
CCA
Trp
>WENV183397599
OLZL01000104
345123
Verrucomicrobiota
TGT
Thr
>WENV183397644
OLZL01001584
345110
Verrucomicrobiota
CCT
Arg
>WENV183397609
OLZL01000190
344839
Verrucomicrobiota
GTG
His
>WENV183397615
OLZL01000231
7274
Verrucomicrobiota
CGA
Ser
>WENV183397614
OLZL01000230
246260
Verrucomicrobiota
>WENV183397606
OLZL01000143
155268
Verrucomicrobiota
CGG
Pro
>WENV183397595
OLZL01000060
246728
Verrucomicrobiota
GAA
Phe
>WENV183397607
OLZL01000148
7256
Verrucomicrobiota
GCT
Ser
>WENV183397617
OLZL01000249
345115
Verrucomicrobiota
CAT
Met
>WENV183397616
OLZL01000237
345119
Verrucomicrobiota
TAC
Val
>WENV183397643
OLZL01001416
345124
Verrucomicrobiota
GTT
Asn
>WENV183397597
OLZL01000078
368497
Verrucomicrobiota
GCC
Gly
>WENV183397634
OLZL01000570
345142
Verrucomicrobiota
CCG
Arg
>WENV183397596
OLZL01000060
154693
Verrucomicrobiota
TGG
Pro
>WENV183397600
OLZL01000118
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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