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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183402493
OLZV01000354
155256
Verrucomicrobiota
TCT
Arg
>WENV183402440
OLZV01000154
246701
Verrucomicrobiota
TTT
Lys
>WENV183403037
OLZV01012134
345141
Verrucomicrobiota
TTG
Gln
>WENV183402740
OLZV01002691
345133
Verrucomicrobiota
GAC
Val
>WENV183402696
OLZV01002026
82054
Verrucomicrobiota
GTA
Tyr
>WENV183402644
OLZV01001466
246677
Verrucomicrobiota
CTT
Lys
>WENV183402761
OLZV01003233
344844
Verrucomicrobiota
GCA
Cys
>WENV183402529
OLZV01000507
155264
Verrucomicrobiota
GGG
Pro
>WENV183402770
OLZV01003358
344845
Verrucomicrobiota
CTG
Gln
>WENV183402610
OLZV01001193
128202
Verrucomicrobiota
GTC
Asp
>WENV183402549
OLZV01000712
414625
Verrucomicrobiota
CCC
Gly
>WENV183402598
OLZV01001014
46246
Verrucomicrobiota
TGA
Ser
>WENV183402591
OLZV01000933
97755
Verrucomicrobiota
TAG
Leu
>WENV183402895
OLZV01006234
246700
Verrucomicrobiota
TTC
Glu
>WENV183402669
OLZV01001762
246687
Verrucomicrobiota
CGC
Ala
>WENV183402550
OLZV01000712
419909
Verrucomicrobiota
TCC
Gly
>WENV183402846
OLZV01005110
344841
Verrucomicrobiota
CAC
Val
>WENV183402643
OLZV01001466
344842
Verrucomicrobiota
CGT
Thr
>WENV183402526
OLZV01000473
170105
Verrucomicrobiota
CAT
Met
>WENV183402542
OLZV01000631
287733
Verrucomicrobiota
CCA
Trp
>WENV183402470
OLZV01000250
345123
Verrucomicrobiota
TGT
Thr
>WENV183402489
OLZV01000340
345110
Verrucomicrobiota
CCT
Arg
>WENV183402900
OLZV01006619
344839
Verrucomicrobiota
GTG
His
>WENV183402528
OLZV01000505
7274
Verrucomicrobiota
CGA
Ser
>WENV183402872
OLZV01005719
246260
Verrucomicrobiota
>WENV183402954
OLZV01008511
155268
Verrucomicrobiota
CGG
Pro
>WENV183402544
OLZV01000640
82181
Verrucomicrobiota
AAG
Leu
>WENV183402635
OLZV01001390
246728
Verrucomicrobiota
GAA
Phe
>WENV183402587
OLZV01000901
7256
Verrucomicrobiota
GCT
Ser
>WENV183402603
OLZV01001079
345115
Verrucomicrobiota
CAT
Met
>WENV183402721
OLZV01002416
345119
Verrucomicrobiota
TAC
Val
>WENV183402532
OLZV01000535
345124
Verrucomicrobiota
GTT
Asn
>WENV183402410
OLZV01000119
17023
Verrucomicrobiota
GGA
Ser
>WENV183402608
OLZV01001134
368497
Verrucomicrobiota
GCC
Gly
>WENV183402909
OLZV01006751
368497
Verrucomicrobiota
GCC
Gly
>WENV183402599
OLZV01001056
345142
Verrucomicrobiota
CCG
Arg
>WENV183402627
OLZV01001299
246709
Verrucomicrobiota
CAT
Met
>WENV183402636
OLZV01001390
154693
Verrucomicrobiota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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