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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
28 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183407325
OMAC01000240
119475
Actinomycetota
TAA
Leu
>WENV183407324
OMAC01000238
144589
Actinomycetota
ACG
Arg
>WENV183407171
OMAC01000069
37070
Actinomycetota
CGA
Ser
>WENV183407262
OMAC01000157
235092
Actinomycetota
CCG
Arg
>WENV183407270
OMAC01000168
16219
Actinomycetota
GCT
Ser
>WENV183407357
OMAC01000288
235174
Actinomycetota
TGC
Ala
>WENV183407345
OMAC01000276
235101
Actinomycetota
TTT
Lys
>WENV183407169
OMAC01000069
144625
Actinomycetota
GTC
Asp
>WENV183407174
OMAC01000069
144625
Actinomycetota
GTC
Asp
>WENV183407241
OMAC01000136
145345
Actinomycetota
TAC
Val
>WENV183407362
OMAC01000292
16223
Actinomycetota
GAG
Leu
>WENV183407375
OMAC01000331
144593
Actinomycetota
TAT
Ile
>WENV183407268
OMAC01000168
98279
Actinomycetota
GTA
Tyr
>WENV183407154
OMAC01000058
338148
Actinomycetota
CTG
Gln
>WENV183407397
OMAC01000366
235148
Actinomycetota
GTT
Asn
>WENV183407571
OMAC01001117
235148
Actinomycetota
GTT
Asn
>WENV183407572
OMAC01001129
176456
Actinomycetota
TCT
Arg
>WENV183407242
OMAC01000137
411554
Actinomycetota
CCC
Gly
>WENV183407334
OMAC01000246
113601
Actinomycetota
TAG
Leu
>WENV183407326
OMAC01000240
144595
Actinomycetota
CAA
Leu
>WENV183407532
OMAC01000912
145343
Actinomycetota
GGG
Pro
>WENV183407529
OMAC01000880
235149
Actinomycetota
CCT
Arg
>WENV183407333
OMAC01000246
235121
Actinomycetota
CGT
Thr
>WENV183407327
OMAC01000240
144635
Actinomycetota
TGG
Pro
>WENV183407243
OMAC01000137
80622
Actinomycetota
CAG
Leu
>WENV183407172
OMAC01000069
44851
Actinomycetota
TGA
Ser
>WENV183407358
OMAC01000288
235173
Actinomycetota
GGC
Ala
>WENV183407313
OMAC01000222
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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