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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
24 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183410157
OMAH01000396
196621
Bacillota
GTC
Asp
>WENV183410220
OMAH01006359
235098
Bacillota
GAC
Val
>WENV183410198
OMAH01002336
148239
Bacillota
TCT
Arg
>WENV183410153
OMAH01000309
144577
Bacillota
GAT
Ile
>WENV183410187
OMAH01001904
304022
Bacillota
GCC
Gly
>WENV183410168
OMAH01000764
11034
Bacillota
GGA
Ser
>WENV183410188
OMAH01001904
235117
Bacillota
TAC
Val
>WENV183410199
OMAH01002336
156937
Bacillota
GTG
His
>WENV183410186
OMAH01001904
235079
Bacillota
GAA
Phe
>WENV183410152
OMAH01000309
235087
Bacillota
TGC
Ala
>WENV183410189
OMAH01002063
338149
Bacillota
CTC
Glu
>WENV183410238
OMAH01010146
245298
Bacillota
CGG
Pro
>WENV183410237
OMAH01010146
411547
Bacillota
CTG
Gln
>WENV183410158
OMAH01000396
235095
Bacillota
GGT
Thr
>WENV183410236
OMAH01009021
411549
Bacillota
TTG
Gln
>WENV183410177
OMAH01001459
80612
Bacillota
GTA
Tyr
>WENV183410229
OMAH01007529
256380
Bacillota
>WENV183410169
OMAH01000782
144583
Bacillota
ACG
Arg
>WENV183410223
OMAH01006710
235171
Bacillota
CCA
Trp
>WENV183410196
OMAH01002336
238974
Bacillota
GAA
Phe
>WENV183410190
OMAH01002063
144621
Bacillota
GTT
Asn
>WENV183410170
OMAH01000899
58712
Bacillota
CAG
Leu
>WENV183410211
OMAH01005326
245296
Bacillota
CCC
Gly
>WENV183410172
OMAH01000998
144594
Bacillota
CAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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