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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183412951
OMAN01000005
119661
Verrucomicrobiota
CAA
Leu
>WENV183412937
OMAN01000002
155256
Verrucomicrobiota
TCT
Arg
>WENV183412936
OMAN01000002
246701
Verrucomicrobiota
TTT
Lys
>WENV183412976
OMAN01000012
345141
Verrucomicrobiota
TTG
Gln
>WENV183412944
OMAN01000004
345133
Verrucomicrobiota
GAC
Val
>WENV183412954
OMAN01000006
82054
Verrucomicrobiota
GTA
Tyr
>WENV183413063
OMAN01000054
246677
Verrucomicrobiota
CTT
Lys
>WENV183412998
OMAN01000019
344844
Verrucomicrobiota
GCA
Cys
>WENV183413057
OMAN01000051
155264
Verrucomicrobiota
GGG
Pro
>WENV183413114
OMAN01000104
344845
Verrucomicrobiota
CTG
Gln
>WENV183413081
OMAN01000074
128202
Verrucomicrobiota
GTC
Asp
>WENV183413115
OMAN01000104
128202
Verrucomicrobiota
GTC
Asp
>WENV183413058
OMAN01000051
414625
Verrucomicrobiota
CCC
Gly
>WENV183413042
OMAN01000045
46246
Verrucomicrobiota
TGA
Ser
>WENV183412952
OMAN01000005
97755
Verrucomicrobiota
TAG
Leu
>WENV183412999
OMAN01000019
246700
Verrucomicrobiota
TTC
Glu
>WENV183413044
OMAN01000045
246700
Verrucomicrobiota
TTC
Glu
>WENV183413001
OMAN01000019
246687
Verrucomicrobiota
CGC
Ala
>WENV183413054
OMAN01000051
419909
Verrucomicrobiota
TCC
Gly
>WENV183412974
OMAN01000012
344841
Verrucomicrobiota
CAC
Val
>WENV183412947
OMAN01000005
82056
Verrucomicrobiota
TAA
Leu
>WENV183413062
OMAN01000054
344842
Verrucomicrobiota
CGT
Thr
>WENV183412955
OMAN01000006
170105
Verrucomicrobiota
CAT
Met
>WENV183413005
OMAN01000024
287733
Verrucomicrobiota
CCA
Trp
>WENV183413000
OMAN01000019
345123
Verrucomicrobiota
TGT
Thr
>WENV183412946
OMAN01000005
345110
Verrucomicrobiota
CCT
Arg
>WENV183413045
OMAN01000045
344839
Verrucomicrobiota
GTG
His
>WENV183413068
OMAN01000061
7274
Verrucomicrobiota
CGA
Ser
>WENV183412948
OMAN01000005
246260
Verrucomicrobiota
>WENV183413064
OMAN01000054
155268
Verrucomicrobiota
CGG
Pro
>WENV183412997
OMAN01000019
82181
Verrucomicrobiota
AAG
Leu
>WENV183413055
OMAN01000051
246728
Verrucomicrobiota
GAA
Phe
>WENV183412949
OMAN01000005
7256
Verrucomicrobiota
GCT
Ser
>WENV183413041
OMAN01000045
345115
Verrucomicrobiota
CAT
Met
>WENV183412945
OMAN01000004
345119
Verrucomicrobiota
TAC
Val
>WENV183412953
OMAN01000006
345124
Verrucomicrobiota
GTT
Asn
>WENV183413080
OMAN01000074
17023
Verrucomicrobiota
GGA
Ser
>WENV183412975
OMAN01000012
368497
Verrucomicrobiota
GCC
Gly
>WENV183413043
OMAN01000045
368497
Verrucomicrobiota
GCC
Gly
>WENV183413073
OMAN01000067
345142
Verrucomicrobiota
CCG
Arg
>WENV183413046
OMAN01000045
246709
Verrucomicrobiota
CAT
Met
>WENV183413056
OMAN01000051
154693
Verrucomicrobiota
TGG
Pro
>WENV183413004
OMAN01000024
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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