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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183438341
OMCF01000002
119661
Verrucomicrobiota
CAA
Leu
>WENV183438745
OMCF01003617
155256
Verrucomicrobiota
TCT
Arg
>WENV183438491
OMCF01000181
246701
Verrucomicrobiota
TTT
Lys
>WENV183438387
OMCF01000038
345141
Verrucomicrobiota
TTG
Gln
>WENV183438381
OMCF01000029
345133
Verrucomicrobiota
GAC
Val
>WENV183438373
OMCF01000020
82054
Verrucomicrobiota
GTA
Tyr
>WENV183438501
OMCF01000215
246677
Verrucomicrobiota
CTT
Lys
>WENV183438638
OMCF01001428
344844
Verrucomicrobiota
GCA
Cys
>WENV183438453
OMCF01000134
155264
Verrucomicrobiota
GGG
Pro
>WENV183438574
OMCF01000688
344845
Verrucomicrobiota
CTG
Gln
>WENV183438380
OMCF01000029
128202
Verrucomicrobiota
GTC
Asp
>WENV183438409
OMCF01000060
128202
Verrucomicrobiota
GTC
Asp
>WENV183438473
OMCF01000149
414625
Verrucomicrobiota
CCC
Gly
>WENV183438363
OMCF01000014
97755
Verrucomicrobiota
TAG
Leu
>WENV183438410
OMCF01000062
246700
Verrucomicrobiota
TTC
Glu
>WENV183438411
OMCF01000062
246700
Verrucomicrobiota
TTC
Glu
>WENV183438541
OMCF01000430
246700
Verrucomicrobiota
TTC
Glu
>WENV183438430
OMCF01000093
347038
Verrucomicrobiota
GCC
Gly
>WENV183438677
OMCF01001911
347038
Verrucomicrobiota
GCC
Gly
>WENV183438421
OMCF01000077
246687
Verrucomicrobiota
CGC
Ala
>WENV183438474
OMCF01000149
419909
Verrucomicrobiota
TCC
Gly
>WENV183438472
OMCF01000146
344841
Verrucomicrobiota
CAC
Val
>WENV183438623
OMCF01001263
60880
Verrucomicrobiota
CAG
Leu
>WENV183438342
OMCF01000002
82056
Verrucomicrobiota
TAA
Leu
>WENV183438500
OMCF01000215
344842
Verrucomicrobiota
CGT
Thr
>WENV183438385
OMCF01000037
170105
Verrucomicrobiota
CAT
Met
>WENV183438414
OMCF01000065
345123
Verrucomicrobiota
TGT
Thr
>WENV183438364
OMCF01000014
345110
Verrucomicrobiota
CCT
Arg
>WENV183438542
OMCF01000430
344839
Verrucomicrobiota
GTG
His
>WENV183438355
OMCF01000008
7274
Verrucomicrobiota
CGA
Ser
>WENV183438343
OMCF01000002
246260
Verrucomicrobiota
>WENV183438560
OMCF01000568
155268
Verrucomicrobiota
CGG
Pro
>WENV183438444
OMCF01000117
82181
Verrucomicrobiota
AAG
Leu
>WENV183438454
OMCF01000134
246728
Verrucomicrobiota
GAA
Phe
>WENV183438344
OMCF01000002
7256
Verrucomicrobiota
GCT
Ser
>WENV183438404
OMCF01000048
345115
Verrucomicrobiota
CAT
Met
>WENV183438403
OMCF01000047
345119
Verrucomicrobiota
TAC
Val
>WENV183438372
OMCF01000020
345124
Verrucomicrobiota
GTT
Asn
>WENV183438652
OMCF01001624
17023
Verrucomicrobiota
GGA
Ser
>WENV183438413
OMCF01000065
345142
Verrucomicrobiota
CCG
Arg
>WENV183438543
OMCF01000430
246709
Verrucomicrobiota
CAT
Met
>WENV183438455
OMCF01000134
154693
Verrucomicrobiota
TGG
Pro
>WENV183438365
OMCF01000015
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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