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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
10 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183441483
OMCH01093240
235347
Actinomycetota
GGC
Ala
>WENV183441461
OMCH01086419
174149
Actinomycetota
GAT
Ile
>WENV183441462
OMCH01086419
235174
Actinomycetota
TGC
Ala
>WENV183441242
OMCH01034263
313386
Actinomycetota
CGT
Thr
>WENV183441174
OMCH01023233
176456
Actinomycetota
TCT
Arg
>WENV183441301
OMCH01042228
144825
Actinomycetota
CAT
Met
>WENV183441243
OMCH01034263
113601
Actinomycetota
TAG
Leu
>WENV183441481
OMCH01091363
240009
Actinomycetota
GGC
Ala
>WENV183441187
OMCH01025228
80622
Actinomycetota
CAG
Leu
>WENV183441366
OMCH01055559
95593
Actinomycetota
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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