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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183441629
OMCJ01004447
144612
Bacillota
TCT
Arg
>WENV183441676
OMCJ01008030
235134
Bacillota
GAA
Phe
>WENV183441697
OMCJ01009203
235098
Bacillota
GAC
Val
>WENV183441661
OMCJ01006810
44854
Bacillota
TGA
Ser
>WENV183441585
OMCJ01000799
144577
Bacillota
GAT
Ile
>WENV183441707
OMCJ01012389
238910
Bacillota
CTT
Lys
>WENV183441723
OMCJ01018279
338147
Bacillota
CTC
Glu
>WENV183441581
OMCJ01000710
235150
Bacillota
TGC
Ala
>WENV183441596
OMCJ01001364
235091
Bacillota
CTT
Lys
>WENV183441717
OMCJ01015272
11034
Bacillota
GGA
Ser
>WENV183441678
OMCJ01008030
235117
Bacillota
TAC
Val
>WENV183441584
OMCJ01000799
235087
Bacillota
TGC
Ala
>WENV183441578
OMCJ01000677
338149
Bacillota
CTC
Glu
>WENV183441638
OMCJ01005504
144610
Bacillota
GTG
His
>WENV183441662
OMCJ01006810
4624
Bacillota
GCT
Ser
>WENV183441588
OMCJ01000817
235095
Bacillota
GGT
Thr
>WENV183441645
OMCJ01005842
419639
Bacillota
GCA
Cys
>WENV183441562
OMCJ01000316
80612
Bacillota
GTA
Tyr
>WENV183441538
OMCJ01000060
163943
Bacillota
GTC
Asp
>WENV183441604
OMCJ01001787
235124
Bacillota
TGG
Pro
>WENV183441592
OMCJ01001015
338129
Bacillota
TGT
Thr
>WENV183441568
OMCJ01000396
144583
Bacillota
ACG
Arg
>WENV183441673
OMCJ01008030
144652
Bacillota
GTC
Asp
>WENV183441586
OMCJ01000817
235171
Bacillota
CCA
Trp
>WENV183441579
OMCJ01000677
144621
Bacillota
GTT
Asn
>WENV183441606
OMCJ01001884
245296
Bacillota
CCC
Gly
>WENV183441644
OMCJ01005842
344240
Bacillota
GCC
Gly
>WENV183441571
OMCJ01000446
248965
Bacillota
GCC
Gly
>WENV183441591
OMCJ01001012
144594
Bacillota
CAC
Val
>WENV183441701
OMCJ01011484
238945
Bacillota
GCC
Gly
>WENV183441677
OMCJ01008030
249259
Bacillota
GCC
Gly
>WENV183441657
OMCJ01006306
338128
Bacillota
TTC
Glu
>WENV183441643
OMCJ01005842
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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