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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183459120
OMDN01018169
196621
Bacillota
GTC
Asp
>WENV183458867
OMDN01001304
309417
Bacillota
GGC
Ala
>WENV183458927
OMDN01002489
158247
Bacillota
>WENV183458956
OMDN01003064
144612
Bacillota
TCT
Arg
>WENV183459172
OMDN01030829
156189
Bacillota
GAT
Ile
>WENV183458849
OMDN01000845
235098
Bacillota
GAC
Val
>WENV183459022
OMDN01006182
44854
Bacillota
TGA
Ser
>WENV183458796
OMDN01000193
59312
Bacillota
CAG
Leu
>WENV183459168
OMDN01030039
239080
Bacillota
CTG
Gln
>WENV183458771
OMDN01000051
338147
Bacillota
CTC
Glu
>WENV183459149
OMDN01024902
235150
Bacillota
TGC
Ala
>WENV183459176
OMDN01031379
338208
Bacillota
>WENV183458907
OMDN01002086
235114
Bacillota
TTT
Lys
>WENV183458795
OMDN01000193
44859
Bacillota
AAG
Leu
>WENV183458890
OMDN01001773
11034
Bacillota
GGA
Ser
>WENV183459119
OMDN01018169
235117
Bacillota
TAC
Val
>WENV183458828
OMDN01000552
156937
Bacillota
GTG
His
>WENV183459066
OMDN01009638
173314
Bacillota
GAT
Ile
>WENV183458839
OMDN01000653
338149
Bacillota
CTC
Glu
>WENV183458871
OMDN01001351
169968
Bacillota
CAT
Met
>WENV183459043
OMDN01007201
411547
Bacillota
CTG
Gln
>WENV183459023
OMDN01006182
4624
Bacillota
GCT
Ser
>WENV183459121
OMDN01018169
235095
Bacillota
GGT
Thr
>WENV183458804
OMDN01000341
235142
Bacillota
CTT
Lys
>WENV183458925
OMDN01002361
163943
Bacillota
GTC
Asp
>WENV183459015
OMDN01005824
235124
Bacillota
TGG
Pro
>WENV183459080
OMDN01011540
338129
Bacillota
TGT
Thr
>WENV183458967
OMDN01003783
247734
Bacillota
TGC
Ala
>WENV183458906
OMDN01002086
235113
Bacillota
GAA
Phe
>WENV183458958
OMDN01003064
58712
Bacillota
CAG
Leu
>WENV183459048
OMDN01007655
245296
Bacillota
CCC
Gly
>WENV183458840
OMDN01000653
272992
Bacillota
CTT
Lys
>WENV183459065
OMDN01009638
299139
Bacillota
TGC
Ala
>WENV183458793
OMDN01000188
95563
Bacillota
GTA
Tyr
>WENV183458872
OMDN01001351
272488
Bacillota
GAA
Phe
>WENV183458876
OMDN01001467
272488
Bacillota
GAA
Phe
>WENV183459102
OMDN01014336
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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