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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183462386
OMDW01005532
196621
Bacillota
GTC
Asp
>WENV183462305
OMDW01002460
309417
Bacillota
GGC
Ala
>WENV183462606
OMDW01044317
155113
Bacillota
CGG
Pro
>WENV183462215
OMDW01000357
144612
Bacillota
TCT
Arg
>WENV183462241
OMDW01000777
144612
Bacillota
TCT
Arg
>WENV183462448
OMDW01009871
148239
Bacillota
TCT
Arg
>WENV183462263
OMDW01001237
44854
Bacillota
TGA
Ser
>WENV183462418
OMDW01007476
144577
Bacillota
GAT
Ile
>WENV183462615
OMDW01051111
59312
Bacillota
CAG
Leu
>WENV183462573
OMDW01032429
338147
Bacillota
CTC
Glu
>WENV183462515
OMDW01019456
235137
Bacillota
TGC
Ala
>WENV183462633
OMDW01059827
429429
Bacillota
CCA
Trp
>WENV183462417
OMDW01007476
235087
Bacillota
TGC
Ala
>WENV183462617
OMDW01051645
173314
Bacillota
GAT
Ile
>WENV183462388
OMDW01005683
338149
Bacillota
CTC
Glu
>WENV183462359
OMDW01004222
245298
Bacillota
CGG
Pro
>WENV183462471
OMDW01013292
245298
Bacillota
CGG
Pro
>WENV183462333
OMDW01003380
413152
Bacillota
TCC
Gly
>WENV183462486
OMDW01015406
144599
Bacillota
GTC
Asp
>WENV183462449
OMDW01009871
144610
Bacillota
GTG
His
>WENV183462358
OMDW01004222
411547
Bacillota
CTG
Gln
>WENV183462470
OMDW01013292
411547
Bacillota
CTG
Gln
>WENV183462264
OMDW01001237
4624
Bacillota
GCT
Ser
>WENV183462387
OMDW01005532
235095
Bacillota
GGT
Thr
>WENV183462314
OMDW01002708
344183
Bacillota
CTG
Gln
>WENV183462317
OMDW01002708
304759
Bacillota
TAC
Val
>WENV183462443
OMDW01009544
411549
Bacillota
TTG
Gln
>WENV183462464
OMDW01011664
411549
Bacillota
TTG
Gln
>WENV183462325
OMDW01002978
148188
Bacillota
CCG
Arg
>WENV183462426
OMDW01008205
148188
Bacillota
CCG
Arg
>WENV183462404
OMDW01006676
80612
Bacillota
GTA
Tyr
>WENV183462591
OMDW01038525
163943
Bacillota
GTC
Asp
>WENV183462555
OMDW01027904
235124
Bacillota
TGG
Pro
>WENV183462373
OMDW01004908
338129
Bacillota
TGT
Thr
>WENV183462342
OMDW01003567
144583
Bacillota
ACG
Arg
>WENV183462463
OMDW01011416
235171
Bacillota
CCA
Trp
>WENV183462389
OMDW01005683
144621
Bacillota
GTT
Asn
>WENV183462403
OMDW01006676
58712
Bacillota
CAG
Leu
>WENV183462532
OMDW01022925
245296
Bacillota
CCC
Gly
>WENV183462477
OMDW01014344
272992
Bacillota
CTT
Lys
>WENV183462252
OMDW01001028
144594
Bacillota
CAC
Val
>WENV183462432
OMDW01008915
114075
Bacillota
TAG
Leu
>WENV183462289
OMDW01002060
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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