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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183471315
OMEM01002937
196621
Bacillota
GTC
Asp
>WENV183471275
OMEM01000517
309417
Bacillota
GGC
Ala
>WENV183471290
OMEM01001543
235098
Bacillota
GAC
Val
>WENV183471298
OMEM01001919
148239
Bacillota
TCT
Arg
>WENV183471314
OMEM01002937
304022
Bacillota
GCC
Gly
>WENV183471337
OMEM01006873
307003
Bacillota
TGC
Ala
>WENV183471278
OMEM01000752
235150
Bacillota
TGC
Ala
>WENV183471307
OMEM01002182
235137
Bacillota
TGC
Ala
>WENV183471313
OMEM01002937
235079
Bacillota
GAA
Phe
>WENV183471317
OMEM01003385
338149
Bacillota
CTC
Glu
>WENV183471328
OMEM01005555
37269
Bacillota
TGA
Ser
>WENV183471299
OMEM01001919
144610
Bacillota
GTG
His
>WENV183471311
OMEM01002937
263765
Bacillota
TAC
Val
>WENV183471316
OMEM01002937
235095
Bacillota
GGT
Thr
>WENV183471344
OMEM01008043
144583
Bacillota
ACG
Arg
>WENV183471318
OMEM01003385
144621
Bacillota
GTT
Asn
>WENV183471308
OMEM01002197
58712
Bacillota
CAG
Leu
>WENV183471351
OMEM01009879
245296
Bacillota
CCC
Gly
>WENV183471321
OMEM01003565
272992
Bacillota
CTT
Lys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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