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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183474818
OMEV01000572
235102
Bacteroidota
CGT
Thr
>WENV183474849
OMEV01000790
144657
Bacteroidota
CGG
Pro
>WENV183474607
OMEV01000064
343138
Bacteroidota
CCT
Arg
>WENV183474838
OMEV01000699
58715
Bacteroidota
GAG
Leu
>WENV183474581
OMEV01000035
46165
Bacteroidota
TGA
Ser
>WENV183474762
OMEV01000331
338486
Bacteroidota
CAT
Met
>WENV183474780
OMEV01000372
338486
Bacteroidota
CAT
Met
>WENV183474605
OMEV01000063
415410
Bacteroidota
TTG
Gln
>WENV183474629
OMEV01000083
411543
Bacteroidota
CTG
Gln
>WENV183474734
OMEV01000255
59689
Bacteroidota
CAG
Leu
>WENV183474635
OMEV01000088
338124
Bacteroidota
CCG
Arg
>WENV183474673
OMEV01000160
338124
Bacteroidota
CCG
Arg
>WENV183474951
OMEV01001672
235203
Bacteroidota
TTT
Lys
>WENV183474583
OMEV01000035
238121
Bacteroidota
CTT
Lys
>WENV183475209
OMEV01007854
126641
Bacteroidota
TAC
Val
>WENV183474518
OMEV01000004
338132
Bacteroidota
GCA
Cys
>WENV183474722
OMEV01000236
338132
Bacteroidota
GCA
Cys
>WENV183474584
OMEV01000035
45423
Bacteroidota
TGA
Ser
>WENV183474582
OMEV01000035
58714
Bacteroidota
CAA
Leu
>WENV183474557
OMEV01000016
144656
Bacteroidota
GTG
His
>WENV183474705
OMEV01000201
235207
Bacteroidota
CAT
Met
>WENV183474736
OMEV01000257
235207
Bacteroidota
CAT
Met
>WENV183474578
OMEV01000032
144659
Bacteroidota
GTG
His
>WENV183474850
OMEV01000790
235180
Bacteroidota
CCA
Trp
>WENV183474512
OMEV01000002
80607
Bacteroidota
GTA
Tyr
>WENV183474598
OMEV01000052
80607
Bacteroidota
GTA
Tyr
>WENV183474576
OMEV01000032
80614
Bacteroidota
>WENV183475117
OMEV01004658
154643
Bacteroidota
CAT
Met
>WENV183474645
OMEV01000107
95559
Bacteroidota
TAG
Leu
>WENV183474655
OMEV01000132
419272
Bacteroidota
CTG
Gln
>WENV183474700
OMEV01000192
419272
Bacteroidota
CTG
Gln
>WENV183474606
OMEV01000064
338164
Bacteroidota
TTC
Glu
>WENV183474725
OMEV01000247
95875
Bacteroidota
TAG
Leu
>WENV183474795
OMEV01000447
240012
Bacteroidota
CCC
Gly
>WENV183474561
OMEV01000017
44852
Bacteroidota
TAA
Leu
>WENV183474667
OMEV01000154
44852
Bacteroidota
TAA
Leu
>WENV183474752
OMEV01000288
147439
Bacteroidota
TCT
Arg
>WENV183474556
OMEV01000016
50727
Bacteroidota
TGA
Ser
>WENV183474567
OMEV01000022
50727
Bacteroidota
TGA
Ser
>WENV183474594
OMEV01000045
50727
Bacteroidota
TGA
Ser
>WENV183474521
OMEV01000005
425638
Bacteroidota
CTG
Gln
>WENV183474701
OMEV01000192
19317
Bacteroidota
GGA
Ser
>WENV183474651
OMEV01000125
185921
Bacteroidota
GTC
Asp
>WENV183474754
OMEV01000302
23696
Bacteroidota
GCT
Ser
>WENV183475406
OMEV01038755
414426
Bacteroidota
CTG
Gln
>WENV183474558
OMEV01000016
16224
Bacteroidota
GGA
Ser
>WENV183474656
OMEV01000132
16220
Bacteroidota
GGA
Ser
>WENV183474628
OMEV01000082
338125
Bacteroidota
CCT
Arg
>WENV183474718
OMEV01000228
235129
Bacteroidota
GCC
Gly
>WENV183475357
OMEV01024365
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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