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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183476160
OMEW01020776
24650
Bacillota
TAA
Leu
>WENV183475734
OMEW01000457
196621
Bacillota
GTC
Asp
>WENV183475849
OMEW01001320
196621
Bacillota
GTC
Asp
>WENV183475633
OMEW01000142
144612
Bacillota
TCT
Arg
>WENV183476144
OMEW01017604
144612
Bacillota
TCT
Arg
>WENV183475766
OMEW01000559
235098
Bacillota
GAC
Val
>WENV183476043
OMEW01007456
235098
Bacillota
GAC
Val
>WENV183475554
OMEW01000050
148239
Bacillota
TCT
Arg
>WENV183475863
OMEW01001647
44854
Bacillota
TGA
Ser
>WENV183476026
OMEW01006904
44854
Bacillota
TGA
Ser
>WENV183475733
OMEW01000457
304022
Bacillota
GCC
Gly
>WENV183475735
OMEW01000457
304022
Bacillota
GCC
Gly
>WENV183476244
OMEW01042363
429443
Bacillota
GCA
Cys
>WENV183476226
OMEW01037073
347827
Bacillota
TTC
Glu
>WENV183475494
OMEW01000024
59312
Bacillota
CAG
Leu
>WENV183475795
OMEW01000818
238910
Bacillota
CTT
Lys
>WENV183475471
OMEW01000011
338147
Bacillota
CTC
Glu
>WENV183476171
OMEW01022476
235150
Bacillota
TGC
Ala
>WENV183475645
OMEW01000164
293599
Bacillota
CTT
Lys
>WENV183475797
OMEW01000829
429429
Bacillota
CCA
Trp
>WENV183475732
OMEW01000457
235079
Bacillota
GAA
Phe
>WENV183476218
OMEW01033788
173314
Bacillota
GAT
Ile
>WENV183475893
OMEW01002252
338149
Bacillota
CTC
Glu
>WENV183475858
OMEW01001543
245298
Bacillota
CGG
Pro
>WENV183476127
OMEW01016294
37269
Bacillota
TGA
Ser
>WENV183476247
OMEW01043220
201704
Bacillota
GAT
Ile
>WENV183476197
OMEW01029642
153911
Bacillota
GAT
Ile
>WENV183475545
OMEW01000047
100326
Bacillota
GTA
Tyr
>WENV183475555
OMEW01000050
144610
Bacillota
GTG
His
>WENV183475483
OMEW01000016
240017
Bacillota
GCC
Gly
>WENV183475485
OMEW01000017
411547
Bacillota
CTG
Gln
>WENV183475857
OMEW01001543
411547
Bacillota
CTG
Gln
>WENV183475864
OMEW01001647
4624
Bacillota
GCT
Ser
>WENV183476027
OMEW01006904
4624
Bacillota
GCT
Ser
>WENV183475482
OMEW01000016
263765
Bacillota
TAC
Val
>WENV183476198
OMEW01029902
412387
Bacillota
GCA
Cys
>WENV183475848
OMEW01001320
235095
Bacillota
GGT
Thr
>WENV183475850
OMEW01001320
235095
Bacillota
GGT
Thr
>WENV183475919
OMEW01002649
419945
Bacillota
GCA
Cys
>WENV183475731
OMEW01000457
411549
Bacillota
TTG
Gln
>WENV183476106
OMEW01013778
235142
Bacillota
CTT
Lys
>WENV183475767
OMEW01000560
148188
Bacillota
CCG
Arg
>WENV183476194
OMEW01028893
80612
Bacillota
GTA
Tyr
>WENV183475819
OMEW01001078
235124
Bacillota
TGG
Pro
>WENV183475689
OMEW01000307
338129
Bacillota
TGT
Thr
>WENV183475912
OMEW01002581
144583
Bacillota
ACG
Arg
>WENV183475542
OMEW01000047
144652
Bacillota
GTC
Asp
>WENV183475580
OMEW01000078
247734
Bacillota
TGC
Ala
>WENV183475907
OMEW01002414
235171
Bacillota
CCA
Trp
>WENV183475929
OMEW01002810
238974
Bacillota
GAA
Phe
>WENV183475650
OMEW01000172
144621
Bacillota
GTT
Asn
>WENV183475894
OMEW01002252
144621
Bacillota
GTT
Asn
>WENV183475712
OMEW01000373
58712
Bacillota
CAG
Leu
>WENV183476115
OMEW01014776
245296
Bacillota
CCC
Gly
>WENV183475846
OMEW01001313
272992
Bacillota
CTT
Lys
>WENV183475918
OMEW01002649
344240
Bacillota
GCC
Gly
>WENV183475917
OMEW01002649
196632
Bacillota
GTC
Asp
>WENV183476077
OMEW01010165
299139
Bacillota
TGC
Ala
>WENV183475584
OMEW01000083
144594
Bacillota
CAC
Val
>WENV183476231
OMEW01038211
272488
Bacillota
GAA
Phe
>WENV183476135
OMEW01016598
114075
Bacillota
TAG
Leu
>WENV183475699
OMEW01000333
338128
Bacillota
TTC
Glu
>WENV183475714
OMEW01000374
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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