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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
19 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183476400
OMEY01000342
235097
Bacteroidota
TTT
Lys
>WENV183476370
OMEY01000001
415410
Bacteroidota
TTG
Gln
>WENV183476393
OMEY01000310
338124
Bacteroidota
CCG
Arg
>WENV183476406
OMEY01000601
338132
Bacteroidota
GCA
Cys
>WENV183476375
OMEY01000035
301449
Bacteroidota
CGG
Pro
>WENV183476387
OMEY01000131
144656
Bacteroidota
GTG
His
>WENV183476391
OMEY01000276
235207
Bacteroidota
CAT
Met
>WENV183476411
OMEY01001178
80607
Bacteroidota
GTA
Tyr
>WENV183476372
OMEY01000015
52358
Bacteroidota
TGA
Ser
>WENV183476426
OMEY01002080
52358
Bacteroidota
TGA
Ser
>WENV183476381
OMEY01000078
144590
Bacteroidota
GTT
Asn
>WENV183476385
OMEY01000115
95559
Bacteroidota
TAG
Leu
>WENV183476405
OMEY01000581
419272
Bacteroidota
CTG
Gln
>WENV183476401
OMEY01000410
144655
Bacteroidota
GGC
Ala
>WENV183476455
OMEY01004694
95875
Bacteroidota
TAG
Leu
>WENV183476378
OMEY01000056
44852
Bacteroidota
TAA
Leu
>WENV183476389
OMEY01000207
132360
Bacteroidota
GGG
Pro
>WENV183476390
OMEY01000272
16220
Bacteroidota
GGA
Ser
>WENV183476384
OMEY01000098
338125
Bacteroidota
CCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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