This is the navigation skips to jump to main contents
Jump to main contents.
tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
Top
|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
41 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183486610
OMFR01002589
119661
Verrucomicrobiota
CAA
Leu
>WENV183486407
OMFR01000642
155256
Verrucomicrobiota
TCT
Arg
>WENV183486343
OMFR01000381
246701
Verrucomicrobiota
TTT
Lys
>WENV183486581
OMFR01002201
345141
Verrucomicrobiota
TTG
Gln
>WENV183486548
OMFR01001748
345133
Verrucomicrobiota
GAC
Val
>WENV183486527
OMFR01001616
82054
Verrucomicrobiota
GTA
Tyr
>WENV183486323
OMFR01000306
246677
Verrucomicrobiota
CTT
Lys
>WENV183486684
OMFR01004045
344844
Verrucomicrobiota
GCA
Cys
>WENV183486573
OMFR01002074
155264
Verrucomicrobiota
GGG
Pro
>WENV183486721
OMFR01005778
344845
Verrucomicrobiota
CTG
Gln
>WENV183486517
OMFR01001513
128202
Verrucomicrobiota
GTC
Asp
>WENV183486445
OMFR01000903
414625
Verrucomicrobiota
CCC
Gly
>WENV183486819
OMFR01012485
46246
Verrucomicrobiota
TGA
Ser
>WENV183486442
OMFR01000877
97755
Verrucomicrobiota
TAG
Leu
>WENV183486459
OMFR01001073
246700
Verrucomicrobiota
TTC
Glu
>WENV183486576
OMFR01002119
246700
Verrucomicrobiota
TTC
Glu
>WENV183486449
OMFR01000968
246687
Verrucomicrobiota
CGC
Ala
>WENV183486444
OMFR01000903
419909
Verrucomicrobiota
TCC
Gly
>WENV183486666
OMFR01003492
344841
Verrucomicrobiota
CAC
Val
>WENV183486382
OMFR01000550
60880
Verrucomicrobiota
CAG
Leu
>WENV183486682
OMFR01004006
82056
Verrucomicrobiota
TAA
Leu
>WENV183486322
OMFR01000306
344842
Verrucomicrobiota
CGT
Thr
>WENV183486468
OMFR01001122
170105
Verrucomicrobiota
CAT
Met
>WENV183486437
OMFR01000841
345123
Verrucomicrobiota
TGT
Thr
>WENV183486605
OMFR01002468
345110
Verrucomicrobiota
CCT
Arg
>WENV183486699
OMFR01004603
344839
Verrucomicrobiota
GTG
His
>WENV183486384
OMFR01000558
7274
Verrucomicrobiota
CGA
Ser
>WENV183486683
OMFR01004006
246260
Verrucomicrobiota
>WENV183486321
OMFR01000306
155268
Verrucomicrobiota
CGG
Pro
>WENV183486448
OMFR01000960
82181
Verrucomicrobiota
AAG
Leu
>WENV183486647
OMFR01003110
246728
Verrucomicrobiota
GAA
Phe
>WENV183486520
OMFR01001566
7256
Verrucomicrobiota
GCT
Ser
>WENV183486815
OMFR01012038
345115
Verrucomicrobiota
CAT
Met
>WENV183486680
OMFR01003951
345119
Verrucomicrobiota
TAC
Val
>WENV183486219
OMFR01000090
345124
Verrucomicrobiota
GTT
Asn
>WENV183486268
OMFR01000164
17023
Verrucomicrobiota
GGA
Ser
>WENV183486557
OMFR01001820
368497
Verrucomicrobiota
GCC
Gly
>WENV183486623
OMFR01002866
345142
Verrucomicrobiota
CCG
Arg
>WENV183486741
OMFR01007077
246709
Verrucomicrobiota
CAT
Met
>WENV183486648
OMFR01003110
154693
Verrucomicrobiota
TGG
Pro
>WENV183486330
OMFR01000337
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
BACK