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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183487433
OMFX01000093
235347
Actinomycetota
GGC
Ala
>WENV183487482
OMFX01002794
37070
Actinomycetota
CGA
Ser
>WENV183487466
OMFX01001334
16219
Actinomycetota
GCT
Ser
>WENV183487432
OMFX01000093
235174
Actinomycetota
TGC
Ala
>WENV183487504
OMFX01004733
16223
Actinomycetota
GAG
Leu
>WENV183487493
OMFX01003775
176456
Actinomycetota
TCT
Arg
>WENV183487436
OMFX01000224
113601
Actinomycetota
TAG
Leu
>WENV183487514
OMFX01006454
144595
Actinomycetota
CAA
Leu
>WENV183487483
OMFX01002868
235149
Actinomycetota
CCT
Arg
>WENV183487494
OMFX01003786
91808
Actinomycetota
CAG
Leu
>WENV183487435
OMFX01000224
235121
Actinomycetota
CGT
Thr
>WENV183487457
OMFX01000667
278447
Actinomycetota
GTG
His
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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