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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183502188
OMGT01000007
119661
Verrucomicrobiota
CAA
Leu
>WENV183502175
OMGT01000001
155256
Verrucomicrobiota
TCT
Arg
>WENV183502174
OMGT01000001
246701
Verrucomicrobiota
TTT
Lys
>WENV183502393
OMGT01000321
345141
Verrucomicrobiota
TTG
Gln
>WENV183502193
OMGT01000009
345133
Verrucomicrobiota
GAC
Val
>WENV183502244
OMGT01000043
82054
Verrucomicrobiota
GTA
Tyr
>WENV183502312
OMGT01000113
246677
Verrucomicrobiota
CTT
Lys
>WENV183502313
OMGT01000113
246677
Verrucomicrobiota
CTT
Lys
>WENV183502253
OMGT01000050
344844
Verrucomicrobiota
GCA
Cys
>WENV183502368
OMGT01000212
155264
Verrucomicrobiota
GGG
Pro
>WENV183502192
OMGT01000009
344845
Verrucomicrobiota
CTG
Gln
>WENV183502195
OMGT01000009
128202
Verrucomicrobiota
GTC
Asp
>WENV183502381
OMGT01000258
128202
Verrucomicrobiota
GTC
Asp
>WENV183502229
OMGT01000032
414625
Verrucomicrobiota
CCC
Gly
>WENV183502340
OMGT01000161
46246
Verrucomicrobiota
TGA
Ser
>WENV183502219
OMGT01000022
97755
Verrucomicrobiota
TAG
Leu
>WENV183502220
OMGT01000023
246700
Verrucomicrobiota
TTC
Glu
>WENV183502221
OMGT01000023
246700
Verrucomicrobiota
TTC
Glu
>WENV183502265
OMGT01000059
246700
Verrucomicrobiota
TTC
Glu
>WENV183502264
OMGT01000059
347038
Verrucomicrobiota
GCC
Gly
>WENV183502418
OMGT01000417
347038
Verrucomicrobiota
GCC
Gly
>WENV183502223
OMGT01000023
246687
Verrucomicrobiota
CGC
Ala
>WENV183502231
OMGT01000032
419909
Verrucomicrobiota
TCC
Gly
>WENV183502186
OMGT01000006
344841
Verrucomicrobiota
CAC
Val
>WENV183502408
OMGT01000382
60880
Verrucomicrobiota
CAG
Leu
>WENV183502189
OMGT01000007
82056
Verrucomicrobiota
TAA
Leu
>WENV183502495
OMGT01001115
344842
Verrucomicrobiota
CGT
Thr
>WENV183502238
OMGT01000036
170105
Verrucomicrobiota
CAT
Met
>WENV183502222
OMGT01000023
345123
Verrucomicrobiota
TGT
Thr
>WENV183502446
OMGT01000602
345110
Verrucomicrobiota
CCT
Arg
>WENV183502266
OMGT01000059
344839
Verrucomicrobiota
GTG
His
>WENV183502286
OMGT01000088
7274
Verrucomicrobiota
CGA
Ser
>WENV183502190
OMGT01000007
246260
Verrucomicrobiota
>WENV183502472
OMGT01000751
155268
Verrucomicrobiota
CGG
Pro
>WENV183502252
OMGT01000050
82181
Verrucomicrobiota
AAG
Leu
>WENV183502323
OMGT01000121
246728
Verrucomicrobiota
GAA
Phe
>WENV183502191
OMGT01000007
7256
Verrucomicrobiota
GCT
Ser
>WENV183502268
OMGT01000059
345115
Verrucomicrobiota
CAT
Met
>WENV183502194
OMGT01000009
345119
Verrucomicrobiota
TAC
Val
>WENV183502243
OMGT01000043
345124
Verrucomicrobiota
GTT
Asn
>WENV183502228
OMGT01000030
17023
Verrucomicrobiota
GGA
Ser
>WENV183502230
OMGT01000032
345142
Verrucomicrobiota
CCG
Arg
>WENV183502267
OMGT01000059
246709
Verrucomicrobiota
CAT
Met
>WENV183502324
OMGT01000121
154693
Verrucomicrobiota
TGG
Pro
>WENV183502250
OMGT01000047
344751
Verrucomicrobiota
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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