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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
174 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183527404
ONZW01000428
144612
Bacillota
TCT
Arg
>WENV183527463
ONZW01000576
144612
Bacillota
TCT
Arg
>WENV183527747
ONZW01002703
267649
Bacillota
TAC
Val
>WENV183527309
ONZW01000224
235098
Bacillota
GAC
Val
>WENV183527538
ONZW01000782
235098
Bacillota
GAC
Val
>WENV183527560
ONZW01000924
235098
Bacillota
GAC
Val
>WENV183528043
ONZW01029316
338152
Bacillota
TTC
Glu
>WENV183527409
ONZW01000436
340263
Bacillota
TTC
Glu
>WENV183527433
ONZW01000488
340263
Bacillota
TTC
Glu
>WENV183527529
ONZW01000756
340263
Bacillota
TTC
Glu
>WENV183527424
ONZW01000461
44854
Bacillota
TGA
Ser
>WENV183527438
ONZW01000491
44854
Bacillota
TGA
Ser
>WENV183527718
ONZW01002263
44854
Bacillota
TGA
Ser
>WENV183528085
ONZW01044677
235154
Bacillota
GTT
Asn
>WENV183527406
ONZW01000430
425593
Bacillota
CCC
Gly
>WENV183527642
ONZW01001424
241441
Bacillota
GCC
Gly
>WENV183527753
ONZW01002844
241441
Bacillota
GCC
Gly
>WENV183527128
ONZW01000040
37549
Bacillota
TAA
Leu
>WENV183527435
ONZW01000488
148348
Bacillota
GTC
Asp
>WENV183527522
ONZW01000756
148348
Bacillota
GTC
Asp
>WENV183527986
ONZW01017836
246023
Bacillota
TGC
Ala
>WENV183527467
ONZW01000593
239080
Bacillota
CTG
Gln
>WENV183527784
ONZW01003432
238910
Bacillota
CTT
Lys
>WENV183527393
ONZW01000382
243119
Bacillota
CTT
Lys
>WENV183528010
ONZW01022852
338147
Bacillota
CTC
Glu
>WENV183528014
ONZW01023424
235150
Bacillota
TGC
Ala
>WENV183527275
ONZW01000186
152047
Bacillota
GGG
Pro
>WENV183527162
ONZW01000065
16820
Bacillota
GCT
Ser
>WENV183528067
ONZW01036419
235137
Bacillota
TGC
Ala
>WENV183528073
ONZW01038066
235137
Bacillota
TGC
Ala
>WENV183527895
ONZW01008476
340802
Bacillota
TTG
Gln
>WENV183527911
ONZW01009501
340802
Bacillota
TTG
Gln
>WENV183528033
ONZW01027094
340802
Bacillota
TTG
Gln
>WENV183527869
ONZW01007079
340802
Bacillota
TTG
Gln
>WENV183527363
ONZW01000318
152512
Bacillota
CCT
Arg
>WENV183527124
ONZW01000040
152459
Bacillota
GTC
Asp
>WENV183527247
ONZW01000167
152459
Bacillota
GTC
Asp
>WENV183527250
ONZW01000167
152459
Bacillota
GTC
Asp
>WENV183528063
ONZW01033820
341763
Bacillota
CTC
Glu
>WENV183527355
ONZW01000306
182792
Bacillota
GTC
Asp
>WENV183527515
ONZW01000748
182792
Bacillota
GTC
Asp
>WENV183528008
ONZW01022768
182792
Bacillota
GTC
Asp
>WENV183527966
ONZW01015809
44859
Bacillota
AAG
Leu
>WENV183527204
ONZW01000110
11034
Bacillota
GGA
Ser
>WENV183527285
ONZW01000197
11034
Bacillota
GGA
Ser
>WENV183527661
ONZW01001525
235117
Bacillota
TAC
Val
>WENV183527436
ONZW01000488
239076
Bacillota
GAA
Phe
>WENV183527523
ONZW01000756
239076
Bacillota
GAA
Phe
>WENV183527959
ONZW01014737
247057
Bacillota
TGC
Ala
>WENV183527964
ONZW01015498
247057
Bacillota
TGC
Ala
>WENV183527582
ONZW01001028
10943
Bacillota
GGA
Ser
>WENV183527584
ONZW01001028
10943
Bacillota
GGA
Ser
>WENV183527894
ONZW01008476
156937
Bacillota
GTG
His
>WENV183527097
ONZW01000030
243646
Bacillota
GTT
Asn
>WENV183527098
ONZW01000030
243646
Bacillota
GTT
Asn
>WENV183527099
ONZW01000030
235697
Bacillota
GTT
Asn
>WENV183527164
ONZW01000065
342736
Bacillota
TTG
Gln
>WENV183527175
ONZW01000081
235079
Bacillota
GAA
Phe
>WENV183527503
ONZW01000706
235079
Bacillota
GAA
Phe
>WENV183527126
ONZW01000040
340265
Bacillota
GCC
Gly
>WENV183527343
ONZW01000268
340265
Bacillota
GCC
Gly
>WENV183527412
ONZW01000436
340265
Bacillota
GCC
Gly
>WENV183527413
ONZW01000436
340265
Bacillota
GCC
Gly
>WENV183527427
ONZW01000474
340265
Bacillota
GCC
Gly
>WENV183527888
ONZW01008233
149041
Bacillota
GTC
Asp
>WENV183527336
ONZW01000251
152513
Bacillota
GAC
Val
>WENV183527272
ONZW01000184
338149
Bacillota
CTC
Glu
>WENV183527441
ONZW01000497
338149
Bacillota
CTC
Glu
>WENV183527979
ONZW01017169
338149
Bacillota
CTC
Glu
>WENV183527191
ONZW01000092
245298
Bacillota
CGG
Pro
>WENV183527334
ONZW01000250
37269
Bacillota
TGA
Ser
>WENV183527480
ONZW01000627
37551
Bacillota
CGA
Ser
>WENV183527249
ONZW01000167
81644
Bacillota
GAG
Leu
>WENV183527251
ONZW01000167
81644
Bacillota
GAG
Leu
>WENV183527742
ONZW01002652
413152
Bacillota
TCC
Gly
>WENV183527903
ONZW01009073
162445
Bacillota
CAT
Met
>WENV183527398
ONZW01000404
152492
Bacillota
GGG
Pro
>WENV183527996
ONZW01019854
153911
Bacillota
GAT
Ile
>WENV183527868
ONZW01007079
144610
Bacillota
GTG
His
>WENV183527910
ONZW01009501
144610
Bacillota
GTG
His
>WENV183528032
ONZW01027094
144610
Bacillota
GTG
His
>WENV183527135
ONZW01000045
411547
Bacillota
CTG
Gln
>WENV183527176
ONZW01000082
411547
Bacillota
CTG
Gln
>WENV183527190
ONZW01000092
411547
Bacillota
CTG
Gln
>WENV183527389
ONZW01000379
411547
Bacillota
CTG
Gln
>WENV183527633
ONZW01001364
411547
Bacillota
CTG
Gln
>WENV183527687
ONZW01001738
147684
Bacillota
ACG
Arg
>WENV183527706
ONZW01002044
147684
Bacillota
ACG
Arg
>WENV183527425
ONZW01000461
4624
Bacillota
GCT
Ser
>WENV183527439
ONZW01000491
4624
Bacillota
GCT
Ser
>WENV183527719
ONZW01002263
4624
Bacillota
GCT
Ser
>WENV183528044
ONZW01029316
412387
Bacillota
GCA
Cys
>WENV183527652
ONZW01001486
243399
Bacillota
CCA
Trp
>WENV183527454
ONZW01000528
18852
Bacillota
GCT
Ser
>WENV183527348
ONZW01000283
235095
Bacillota
GGT
Thr
>WENV183527516
ONZW01000748
235095
Bacillota
GGT
Thr
>WENV183527517
ONZW01000748
235095
Bacillota
GGT
Thr
>WENV183527738
ONZW01002545
235095
Bacillota
GGT
Thr
>WENV183528009
ONZW01022768
235095
Bacillota
GGT
Thr
>WENV183527127
ONZW01000040
419945
Bacillota
GCA
Cys
>WENV183527886
ONZW01008233
239832
Bacillota
TGT
Thr
>WENV183527410
ONZW01000436
239079
Bacillota
TAC
Val
>WENV183527434
ONZW01000488
239079
Bacillota
TAC
Val
>WENV183527437
ONZW01000488
239079
Bacillota
TAC
Val
>WENV183527359
ONZW01000306
411549
Bacillota
TTG
Gln
>WENV183527646
ONZW01001447
411549
Bacillota
TTG
Gln
>WENV183527540
ONZW01000789
152045
Bacillota
CAT
Met
>WENV183527252
ONZW01000167
37588
Bacillota
TGA
Ser
>WENV183527156
ONZW01000063
148188
Bacillota
CCG
Arg
>WENV183527402
ONZW01000427
148188
Bacillota
CCG
Arg
>WENV183527419
ONZW01000453
148188
Bacillota
CCG
Arg
>WENV183527323
ONZW01000232
152046
Bacillota
TCT
Arg
>WENV183527189
ONZW01000092
80612
Bacillota
GTA
Tyr
>WENV183527422
ONZW01000456
80612
Bacillota
GTA
Tyr
>WENV183527455
ONZW01000541
80612
Bacillota
GTA
Tyr
>WENV183527676
ONZW01001653
80612
Bacillota
GTA
Tyr
>WENV183527768
ONZW01003020
80612
Bacillota
GTA
Tyr
>WENV183527546
ONZW01000812
235127
Bacillota
TTT
Lys
>WENV183527725
ONZW01002285
235127
Bacillota
TTT
Lys
>WENV183527653
ONZW01001486
152051
Bacillota
ACG
Arg
>WENV183527722
ONZW01002285
147674
Bacillota
TCT
Arg
>WENV183527621
ONZW01001235
235124
Bacillota
TGG
Pro
>WENV183527691
ONZW01001823
235124
Bacillota
TGG
Pro
>WENV183527707
ONZW01002051
235124
Bacillota
TGG
Pro
>WENV183528006
ONZW01022298
235124
Bacillota
TGG
Pro
>WENV183528029
ONZW01026205
235124
Bacillota
TGG
Pro
>WENV183527667
ONZW01001568
338129
Bacillota
TGT
Thr
>WENV183527159
ONZW01000063
144583
Bacillota
ACG
Arg
>WENV183528001
ONZW01021279
144583
Bacillota
ACG
Arg
>WENV183527908
ONZW01009501
419877
Bacillota
TCC
Gly
>WENV183527514
ONZW01000748
235171
Bacillota
CCA
Trp
>WENV183527196
ONZW01000097
144621
Bacillota
GTT
Asn
>WENV183527273
ONZW01000184
144621
Bacillota
GTT
Asn
>WENV183527442
ONZW01000497
144621
Bacillota
GTT
Asn
>WENV183527483
ONZW01000640
144621
Bacillota
GTT
Asn
>WENV183528074
ONZW01038759
144621
Bacillota
GTT
Asn
>WENV183527205
ONZW01000111
58712
Bacillota
CAG
Leu
>WENV183527476
ONZW01000615
58712
Bacillota
CAG
Leu
>WENV183527873
ONZW01007555
58712
Bacillota
CAG
Leu
>WENV183527269
ONZW01000180
245296
Bacillota
CCC
Gly
>WENV183527421
ONZW01000455
245296
Bacillota
CCC
Gly
>WENV183527781
ONZW01003339
272992
Bacillota
CTT
Lys
>WENV183527833
ONZW01005193
272992
Bacillota
CTT
Lys
>WENV183527980
ONZW01017169
272992
Bacillota
CTT
Lys
>WENV183528024
ONZW01025585
272992
Bacillota
CTT
Lys
>WENV183528039
ONZW01028051
272992
Bacillota
CTT
Lys
>WENV183527408
ONZW01000436
239078
Bacillota
TTT
Lys
>WENV183527432
ONZW01000488
239078
Bacillota
TTT
Lys
>WENV183528031
ONZW01027094
157635
Bacillota
TCT
Arg
>WENV183527867
ONZW01007079
157635
Bacillota
TCT
Arg
>WENV183527909
ONZW01009501
157635
Bacillota
TCT
Arg
>WENV183527465
ONZW01000586
144594
Bacillota
CAC
Val
>WENV183527769
ONZW01003060
144594
Bacillota
CAC
Val
>WENV183527988
ONZW01018382
119513
Bacillota
CAA
Leu
>WENV183527319
ONZW01000231
238945
Bacillota
GCC
Gly
>WENV183527757
ONZW01002931
238945
Bacillota
GCC
Gly
>WENV183527759
ONZW01002931
238945
Bacillota
GCC
Gly
>WENV183527794
ONZW01003678
238945
Bacillota
GCC
Gly
>WENV183527137
ONZW01000045
249259
Bacillota
GCC
Gly
>WENV183527356
ONZW01000306
249259
Bacillota
GCC
Gly
>WENV183527386
ONZW01000378
249259
Bacillota
GCC
Gly
>WENV183527426
ONZW01000466
249259
Bacillota
GCC
Gly
>WENV183527504
ONZW01000706
249259
Bacillota
GCC
Gly
>WENV183527660
ONZW01001525
249259
Bacillota
GCC
Gly
>WENV183527763
ONZW01002937
249259
Bacillota
GCC
Gly
>WENV183527939
ONZW01012382
249259
Bacillota
GCC
Gly
>WENV183527961
ONZW01014958
249259
Bacillota
GCC
Gly
>WENV183527993
ONZW01019160
249259
Bacillota
GCC
Gly
>WENV183527997
ONZW01020061
249259
Bacillota
GCC
Gly
>WENV183528020
ONZW01024490
249259
Bacillota
GCC
Gly
>WENV183527096
ONZW01000030
287034
Bacillota
GTT
Asn
>WENV183527158
ONZW01000063
338128
Bacillota
TTC
Glu
>WENV183527500
ONZW01000689
338128
Bacillota
TTC
Glu
>WENV183527648
ONZW01001453
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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