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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
11 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183535868
OOAG01000371
235153
Actinomycetota
CCT
Arg
>WENV183536539
OOAG01005874
245301
Actinomycetota
GCC
Gly
>WENV183536541
OOAG01005874
245301
Actinomycetota
GCC
Gly
>WENV183536542
OOAG01005874
245301
Actinomycetota
GCC
Gly
>WENV183536012
OOAG01000814
153948
Actinomycetota
GGG
Pro
>WENV183535695
OOAG01000100
144636
Actinomycetota
GAT
Ile
>WENV183535942
OOAG01000557
338139
Actinomycetota
GTT
Asn
>WENV183535543
OOAG01000005
414234
Actinomycetota
CTG
Gln
>WENV183537037
OOAG01030231
47164
Actinomycetota
GGA
Ser
>WENV183535593
OOAG01000028
158513
Actinomycetota
TGG
Pro
>WENV183536540
OOAG01005874
412834
Actinomycetota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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