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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183538510
OOAH01006637
26899
Bacillota
GGA
Ser
>WENV183538730
OOAH01039750
16842
Bacillota
CGA
Ser
>WENV183538082
OOAH01001353
144612
Bacillota
TCT
Arg
>WENV183538272
OOAH01002486
144612
Bacillota
TCT
Arg
>WENV183538604
OOAH01014262
418445
Bacillota
TCC
Gly
>WENV183537832
OOAH01000595
235098
Bacillota
GAC
Val
>WENV183537981
OOAH01000998
235098
Bacillota
GAC
Val
>WENV183538305
OOAH01002769
235098
Bacillota
GAC
Val
>WENV183538439
OOAH01005026
235098
Bacillota
GAC
Val
>WENV183538004
OOAH01001040
338152
Bacillota
TTC
Glu
>WENV183537987
OOAH01001015
340263
Bacillota
TTC
Glu
>WENV183538234
OOAH01002146
340263
Bacillota
TTC
Glu
>WENV183538135
OOAH01001543
44854
Bacillota
TGA
Ser
>WENV183538003
OOAH01001040
235154
Bacillota
GTT
Asn
>WENV183538473
OOAH01006028
148348
Bacillota
GTC
Asp
>WENV183537520
OOAH01000107
37071
Bacillota
TGA
Ser
>WENV183538189
OOAH01001937
246023
Bacillota
TGC
Ala
>WENV183537487
OOAH01000081
59312
Bacillota
CAG
Leu
>WENV183538317
OOAH01002928
239080
Bacillota
CTG
Gln
>WENV183537324
OOAH01000001
338147
Bacillota
CTC
Glu
>WENV183537390
OOAH01000030
338147
Bacillota
CTC
Glu
>WENV183537391
OOAH01000030
338147
Bacillota
CTC
Glu
>WENV183537392
OOAH01000030
338147
Bacillota
CTC
Glu
>WENV183537506
OOAH01000097
338147
Bacillota
CTC
Glu
>WENV183538174
OOAH01001827
338147
Bacillota
CTC
Glu
>WENV183537729
OOAH01000351
155273
Bacillota
CAT
Met
>WENV183538466
OOAH01005673
235294
Bacillota
TGC
Ala
>WENV183538410
OOAH01004562
419288
Bacillota
GGT
Thr
>WENV183537619
OOAH01000216
235114
Bacillota
TTT
Lys
>WENV183538717
OOAH01036363
341763
Bacillota
CTC
Glu
>WENV183537485
OOAH01000081
44859
Bacillota
AAG
Leu
>WENV183537486
OOAH01000081
44859
Bacillota
AAG
Leu
>WENV183538318
OOAH01002951
11034
Bacillota
GGA
Ser
>WENV183538435
OOAH01004866
11034
Bacillota
GGA
Ser
>WENV183538483
OOAH01006154
11034
Bacillota
GGA
Ser
>WENV183538474
OOAH01006028
239076
Bacillota
GAA
Phe
>WENV183538021
OOAH01001092
247057
Bacillota
TGC
Ala
>WENV183538008
OOAH01001051
243646
Bacillota
GTT
Asn
>WENV183538009
OOAH01001051
243646
Bacillota
GTT
Asn
>WENV183538736
OOAH01041161
235079
Bacillota
GAA
Phe
>WENV183537989
OOAH01001015
340265
Bacillota
GCC
Gly
>WENV183537990
OOAH01001015
340265
Bacillota
GCC
Gly
>WENV183538482
OOAH01006048
16266
Bacillota
GCT
Ser
>WENV183538449
OOAH01005323
338149
Bacillota
CTC
Glu
>WENV183538501
OOAH01006287
338149
Bacillota
CTC
Glu
>WENV183538543
OOAH01008006
338149
Bacillota
CTC
Glu
>WENV183538569
OOAH01009442
338149
Bacillota
CTC
Glu
>WENV183538425
OOAH01004793
338149
Bacillota
CTC
Glu
>WENV183538464
OOAH01005673
144766
Bacillota
CAT
Met
>WENV183537849
OOAH01000629
245298
Bacillota
CGG
Pro
>WENV183537853
OOAH01000636
245298
Bacillota
CGG
Pro
>WENV183538075
OOAH01001313
245298
Bacillota
CGG
Pro
>WENV183537546
OOAH01000142
37269
Bacillota
TGA
Ser
>WENV183538669
OOAH01025396
413152
Bacillota
TCC
Gly
>WENV183537620
OOAH01000221
173810
Bacillota
CAT
Met
>WENV183538758
OOAH01049106
173810
Bacillota
CAT
Met
>WENV183537944
OOAH01000845
152492
Bacillota
GGG
Pro
>WENV183538742
OOAH01042496
153911
Bacillota
GAT
Ile
>WENV183538413
OOAH01004629
100326
Bacillota
GTA
Tyr
>WENV183537617
OOAH01000216
144610
Bacillota
GTG
His
>WENV183537890
OOAH01000716
240017
Bacillota
GCC
Gly
>WENV183537848
OOAH01000629
411547
Bacillota
CTG
Gln
>WENV183537852
OOAH01000636
411547
Bacillota
CTG
Gln
>WENV183538074
OOAH01001313
411547
Bacillota
CTG
Gln
>WENV183538503
OOAH01006331
411547
Bacillota
CTG
Gln
>WENV183538226
OOAH01002112
411547
Bacillota
CTG
Gln
>WENV183538176
OOAH01001855
411547
Bacillota
CTG
Gln
>WENV183537730
OOAH01000353
147684
Bacillota
ACG
Arg
>WENV183538136
OOAH01001543
4624
Bacillota
GCT
Ser
>WENV183538060
OOAH01001272
263765
Bacillota
TAC
Val
>WENV183538462
OOAH01005673
263765
Bacillota
TAC
Val
>WENV183537701
OOAH01000310
419639
Bacillota
GCA
Cys
>WENV183537988
OOAH01001015
239079
Bacillota
TAC
Val
>WENV183538465
OOAH01005673
144962
Bacillota
CAT
Met
>WENV183538073
OOAH01001313
411549
Bacillota
TTG
Gln
>WENV183538239
OOAH01002173
411549
Bacillota
TTG
Gln
>WENV183538309
OOAH01002798
411549
Bacillota
TTG
Gln
>WENV183538384
OOAH01004027
411549
Bacillota
TTG
Gln
>WENV183537623
OOAH01000224
235142
Bacillota
CTT
Lys
>WENV183537633
OOAH01000239
235142
Bacillota
CTT
Lys
>WENV183537631
OOAH01000235
245386
Bacillota
CCA
Trp
>WENV183538516
OOAH01006797
258997
Bacillota
CTT
Lys
>WENV183538105
OOAH01001469
148188
Bacillota
CCG
Arg
>WENV183538447
OOAH01005287
148188
Bacillota
CCG
Arg
>WENV183538453
OOAH01005373
148188
Bacillota
CCG
Arg
>WENV183538229
OOAH01002125
80612
Bacillota
GTA
Tyr
>WENV183538527
OOAH01007060
80612
Bacillota
GTA
Tyr
>WENV183538316
OOAH01002919
235124
Bacillota
TGG
Pro
>WENV183538377
OOAH01003926
235124
Bacillota
TGG
Pro
>WENV183538563
OOAH01009258
235124
Bacillota
TGG
Pro
>WENV183537850
OOAH01000633
338129
Bacillota
TGT
Thr
>WENV183538032
OOAH01001128
338129
Bacillota
TGT
Thr
>WENV183538228
OOAH01002125
338129
Bacillota
TGT
Thr
>WENV183538246
OOAH01002217
338129
Bacillota
TGT
Thr
>WENV183537998
OOAH01001027
157838
Bacillota
GTC
Asp
>WENV183538242
OOAH01002185
144583
Bacillota
ACG
Arg
>WENV183538571
OOAH01009464
144583
Bacillota
ACG
Arg
>WENV183537610
OOAH01000216
144652
Bacillota
GTC
Asp
>WENV183538514
OOAH01006797
247734
Bacillota
TGC
Ala
>WENV183538579
OOAH01010207
235171
Bacillota
CCA
Trp
>WENV183538769
OOAH01055641
235171
Bacillota
CCA
Trp
>WENV183538281
OOAH01002602
238974
Bacillota
GAA
Phe
>WENV183538024
OOAH01001100
144621
Bacillota
GTT
Asn
>WENV183538172
OOAH01001820
144621
Bacillota
GTT
Asn
>WENV183538426
OOAH01004793
144621
Bacillota
GTT
Asn
>WENV183538450
OOAH01005323
144621
Bacillota
GTT
Asn
>WENV183538502
OOAH01006287
144621
Bacillota
GTT
Asn
>WENV183538544
OOAH01008006
144621
Bacillota
GTT
Asn
>WENV183538570
OOAH01009442
144621
Bacillota
GTT
Asn
>WENV183537521
OOAH01000107
235113
Bacillota
GAA
Phe
>WENV183537589
OOAH01000183
243098
Bacillota
GGT
Thr
>WENV183537774
OOAH01000434
58712
Bacillota
CAG
Leu
>WENV183538509
OOAH01006594
58712
Bacillota
CAG
Leu
>WENV183538530
OOAH01007100
58712
Bacillota
CAG
Leu
>WENV183538253
OOAH01002292
245296
Bacillota
CCC
Gly
>WENV183538348
OOAH01003434
245296
Bacillota
CCC
Gly
>WENV183537986
OOAH01001015
239078
Bacillota
TTT
Lys
>WENV183537441
OOAH01000060
344240
Bacillota
GCC
Gly
>WENV183538456
OOAH01005468
242686
Bacillota
TGC
Ala
>WENV183538430
OOAH01004823
144594
Bacillota
CAC
Val
>WENV183537567
OOAH01000161
95563
Bacillota
GTA
Tyr
>WENV183537481
OOAH01000078
338127
Bacillota
TTG
Gln
>WENV183538196
OOAH01001979
272488
Bacillota
GAA
Phe
>WENV183538247
OOAH01002239
272488
Bacillota
GAA
Phe
>WENV183538376
OOAH01003863
114075
Bacillota
TAG
Leu
>WENV183537381
OOAH01000028
238945
Bacillota
GCC
Gly
>WENV183538035
OOAH01001146
238945
Bacillota
GCC
Gly
>WENV183538036
OOAH01001146
238945
Bacillota
GCC
Gly
>WENV183538393
OOAH01004157
249259
Bacillota
GCC
Gly
>WENV183538603
OOAH01014262
338207
Bacillota
TTC
Glu
>WENV183538030
OOAH01001119
338128
Bacillota
TTC
Glu
>WENV183538100
OOAH01001446
338128
Bacillota
TTC
Glu
>WENV183538288
OOAH01002642
338128
Bacillota
TTC
Glu
>WENV183538632
OOAH01019008
245344
Bacillota
GAA
Phe
>WENV183538713
OOAH01035277
150669
Bacillota
GAT
Ile
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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