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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
81 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183537447
OOAH01000063
235097
Bacteroidota
TTT
Lys
>WENV183537455
OOAH01000067
235097
Bacteroidota
TTT
Lys
>WENV183537884
OOAH01000695
235097
Bacteroidota
TTT
Lys
>WENV183538705
OOAH01033775
235097
Bacteroidota
TTT
Lys
>WENV183538626
OOAH01017921
339412
Bacteroidota
GGT
Thr
>WENV183538596
OOAH01012700
235102
Bacteroidota
CGT
Thr
>WENV183538364
OOAH01003671
144657
Bacteroidota
CGG
Pro
>WENV183537765
OOAH01000421
243025
Bacteroidota
CAT
Met
>WENV183538241
OOAH01002184
243025
Bacteroidota
CAT
Met
>WENV183537708
OOAH01000321
338155
Bacteroidota
CTC
Glu
>WENV183538650
OOAH01022051
343138
Bacteroidota
CCT
Arg
>WENV183538324
OOAH01003034
58715
Bacteroidota
GAG
Leu
>WENV183537492
OOAH01000082
46165
Bacteroidota
TGA
Ser
>WENV183537488
OOAH01000082
17323
Bacteroidota
GGA
Ser
>WENV183538479
OOAH01006032
95618
Bacteroidota
TAG
Leu
>WENV183537769
OOAH01000423
338486
Bacteroidota
CAT
Met
>WENV183537512
OOAH01000100
48053
Bacteroidota
TGA
Ser
>WENV183537513
OOAH01000100
48053
Bacteroidota
TGA
Ser
>WENV183537775
OOAH01000443
48053
Bacteroidota
TGA
Ser
>WENV183538012
OOAH01001058
48053
Bacteroidota
TGA
Ser
>WENV183538065
OOAH01001279
48053
Bacteroidota
TGA
Ser
>WENV183538436
OOAH01004916
48053
Bacteroidota
TGA
Ser
>WENV183537866
OOAH01000662
415410
Bacteroidota
TTG
Gln
>WENV183538171
OOAH01001816
415410
Bacteroidota
TTG
Gln
>WENV183538707
OOAH01034285
237797
Bacteroidota
CCA
Trp
>WENV183538323
OOAH01003034
59689
Bacteroidota
CAG
Leu
>WENV183538534
OOAH01007316
412479
Bacteroidota
TTG
Gln
>WENV183538153
OOAH01001661
80835
Bacteroidota
GTA
Tyr
>WENV183538553
OOAH01008525
80835
Bacteroidota
GTA
Tyr
>WENV183537489
OOAH01000082
344692
Bacteroidota
GGT
Thr
>WENV183537345
OOAH01000006
145504
Bacteroidota
TGT
Thr
>WENV183538540
OOAH01007681
341950
Bacteroidota
>WENV183538320
OOAH01002970
338124
Bacteroidota
CCG
Arg
>WENV183537348
OOAH01000007
338132
Bacteroidota
GCA
Cys
>WENV183537349
OOAH01000007
338132
Bacteroidota
GCA
Cys
>WENV183537704
OOAH01000318
338132
Bacteroidota
GCA
Cys
>WENV183537748
OOAH01000383
338132
Bacteroidota
GCA
Cys
>WENV183537920
OOAH01000801
338132
Bacteroidota
GCA
Cys
>WENV183537948
OOAH01000859
338132
Bacteroidota
GCA
Cys
>WENV183538513
OOAH01006735
144688
Bacteroidota
CAT
Met
>WENV183538765
OOAH01052102
37076
Bacteroidota
TAA
Leu
>WENV183538627
OOAH01018530
58714
Bacteroidota
CAA
Leu
>WENV183537516
OOAH01000101
235165
Bacteroidota
CCA
Trp
>WENV183537789
OOAH01000484
144933
Bacteroidota
TCT
Arg
>WENV183538519
OOAH01006927
144656
Bacteroidota
GTG
His
>WENV183537641
OOAH01000243
235207
Bacteroidota
CAT
Met
>WENV183537715
OOAH01000332
235207
Bacteroidota
CAT
Met
>WENV183537790
OOAH01000492
235207
Bacteroidota
CAT
Met
>WENV183537791
OOAH01000492
235207
Bacteroidota
CAT
Met
>WENV183537768
OOAH01000423
144596
Bacteroidota
GGC
Ala
>WENV183537762
OOAH01000417
80607
Bacteroidota
GTA
Tyr
>WENV183537943
OOAH01000843
80607
Bacteroidota
GTA
Tyr
>WENV183538506
OOAH01006408
80607
Bacteroidota
GTA
Tyr
>WENV183537958
OOAH01000908
80614
Bacteroidota
>WENV183537697
OOAH01000301
154643
Bacteroidota
CAT
Met
>WENV183537880
OOAH01000682
154643
Bacteroidota
CAT
Met
>WENV183538178
OOAH01001865
95559
Bacteroidota
TAG
Leu
>WENV183537951
OOAH01000884
419272
Bacteroidota
CTG
Gln
>WENV183538508
OOAH01006514
144655
Bacteroidota
GGC
Ala
>WENV183537344
OOAH01000006
144639
Bacteroidota
GGC
Ala
>WENV183538564
OOAH01009268
95875
Bacteroidota
TAG
Leu
>WENV183538251
OOAH01002259
240012
Bacteroidota
CCC
Gly
>WENV183537377
OOAH01000026
44852
Bacteroidota
TAA
Leu
>WENV183537373
OOAH01000024
132360
Bacteroidota
GGG
Pro
>WENV183537551
OOAH01000149
132360
Bacteroidota
GGG
Pro
>WENV183537802
OOAH01000518
132360
Bacteroidota
GGG
Pro
>WENV183537842
OOAH01000617
132360
Bacteroidota
GGG
Pro
>WENV183537432
OOAH01000051
353927
Bacteroidota
TTC
Glu
>WENV183537647
OOAH01000255
353927
Bacteroidota
TTC
Glu
>WENV183538298
OOAH01002722
353927
Bacteroidota
TTC
Glu
>WENV183538552
OOAH01008525
146530
Bacteroidota
TGT
Thr
>WENV183537707
OOAH01000321
23696
Bacteroidota
GCT
Ser
>WENV183537578
OOAH01000170
414426
Bacteroidota
CTG
Gln
>WENV183537446
OOAH01000063
16224
Bacteroidota
GGA
Ser
>WENV183537795
OOAH01000503
16224
Bacteroidota
GGA
Ser
>WENV183538014
OOAH01001069
151960
Bacteroidota
GGC
Ala
>WENV183538091
OOAH01001386
151960
Bacteroidota
GGC
Ala
>WENV183538038
OOAH01001154
16220
Bacteroidota
GGA
Ser
>WENV183538344
OOAH01003378
338125
Bacteroidota
CCT
Arg
>WENV183538173
OOAH01001821
235129
Bacteroidota
GCC
Gly
>WENV183538535
OOAH01007350
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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