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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
48 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183550337
OOBB01001566
144612
Bacillota
TCT
Arg
>WENV183550452
OOBB01005112
235134
Bacillota
GAA
Phe
>WENV183550508
OOBB01010375
235098
Bacillota
GAC
Val
>WENV183550492
OOBB01007683
44854
Bacillota
TGA
Ser
>WENV183550169
OOBB01000374
11034
Bacillota
GGA
Ser
>WENV183550234
OOBB01000744
235079
Bacillota
GAA
Phe
>WENV183550507
OOBB01010300
16266
Bacillota
GCT
Ser
>WENV183550206
OOBB01000612
338149
Bacillota
CTC
Glu
>WENV183550326
OOBB01001383
338149
Bacillota
CTC
Glu
>WENV183550529
OOBB01013133
338149
Bacillota
CTC
Glu
>WENV183550606
OOBB01028478
338149
Bacillota
CTC
Glu
>WENV183550368
OOBB01002621
245298
Bacillota
CGG
Pro
>WENV183550457
OOBB01005454
37269
Bacillota
TGA
Ser
>WENV183550384
OOBB01002993
144599
Bacillota
GTC
Asp
>WENV183550331
OOBB01001447
100326
Bacillota
GTA
Tyr
>WENV183550453
OOBB01005112
240017
Bacillota
GCC
Gly
>WENV183550367
OOBB01002621
411547
Bacillota
CTG
Gln
>WENV183550585
OOBB01023489
411547
Bacillota
CTG
Gln
>WENV183550493
OOBB01007683
4624
Bacillota
GCT
Ser
>WENV183550450
OOBB01005112
263765
Bacillota
TAC
Val
>WENV183550511
OOBB01010549
235095
Bacillota
GGT
Thr
>WENV183549961
OOBB01000018
344183
Bacillota
CTG
Gln
>WENV183550227
OOBB01000671
411549
Bacillota
TTG
Gln
>WENV183550528
OOBB01012751
148188
Bacillota
CCG
Arg
>WENV183550414
OOBB01004276
235127
Bacillota
TTT
Lys
>WENV183550360
OOBB01002293
235124
Bacillota
TGG
Pro
>WENV183550385
OOBB01002993
254433
Bacillota
TAC
Val
>WENV183550430
OOBB01004602
338129
Bacillota
TGT
Thr
>WENV183550462
OOBB01005642
144583
Bacillota
ACG
Arg
>WENV183550549
OOBB01015312
247734
Bacillota
TGC
Ala
>WENV183550328
OOBB01001415
235171
Bacillota
CCA
Trp
>WENV183550207
OOBB01000612
144621
Bacillota
GTT
Asn
>WENV183550272
OOBB01000924
144621
Bacillota
GTT
Asn
>WENV183550327
OOBB01001383
144621
Bacillota
GTT
Asn
>WENV183550530
OOBB01013133
144621
Bacillota
GTT
Asn
>WENV183550274
OOBB01000940
58712
Bacillota
CAG
Leu
>WENV183550435
OOBB01004687
58712
Bacillota
CAG
Leu
>WENV183550182
OOBB01000444
245296
Bacillota
CCC
Gly
>WENV183550607
OOBB01028478
272992
Bacillota
CTT
Lys
>WENV183550200
OOBB01000584
144594
Bacillota
CAC
Val
>WENV183550358
OOBB01002255
144594
Bacillota
CAC
Val
>WENV183550413
OOBB01004276
272488
Bacillota
GAA
Phe
>WENV183550235
OOBB01000744
249259
Bacillota
GCC
Gly
>WENV183550237
OOBB01000744
249259
Bacillota
GCC
Gly
>WENV183550313
OOBB01001256
249259
Bacillota
GCC
Gly
>WENV183550487
OOBB01007086
249259
Bacillota
GCC
Gly
>WENV183550469
OOBB01006119
338128
Bacillota
TTC
Glu
>WENV183550523
OOBB01011911
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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