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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
63 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183552902
OOBK01000018
235146
Actinomycetota
CGT
Thr
>WENV183552993
OOBK01000174
235347
Actinomycetota
GGC
Ala
>WENV183553441
OOBK01004534
235153
Actinomycetota
CCT
Arg
>WENV183553189
OOBK01001040
144589
Actinomycetota
ACG
Arg
>WENV183553377
OOBK01003270
37070
Actinomycetota
CGA
Ser
>WENV183552983
OOBK01000145
201717
Actinomycetota
CTT
Lys
>WENV183552994
OOBK01000174
144600
Actinomycetota
TGG
Pro
>WENV183552964
OOBK01000103
235194
Actinomycetota
GTG
His
>WENV183553022
OOBK01000232
158720
Actinomycetota
ACG
Arg
>WENV183553520
OOBK01008692
245301
Actinomycetota
GCC
Gly
>WENV183552886
OOBK01000011
411601
Actinomycetota
CCC
Gly
>WENV183552868
OOBK01000004
144826
Actinomycetota
GGG
Pro
>WENV183552951
OOBK01000080
23370
Actinomycetota
GCT
Ser
>WENV183552888
OOBK01000011
174149
Actinomycetota
GAT
Ile
>WENV183552889
OOBK01000011
235174
Actinomycetota
TGC
Ala
>WENV183552865
OOBK01000002
235101
Actinomycetota
TTT
Lys
>WENV183552890
OOBK01000013
121510
Actinomycetota
TAA
Leu
>WENV183553531
OOBK01009591
145423
Actinomycetota
TCT
Arg
>WENV183552956
OOBK01000089
44855
Actinomycetota
TGA
Ser
>WENV183552905
OOBK01000018
235199
Actinomycetota
CAC
Val
>WENV183553343
OOBK01002639
44862
Actinomycetota
CGA
Ser
>WENV183552900
OOBK01000018
313386
Actinomycetota
CGT
Thr
>WENV183552939
OOBK01000061
198659
Actinomycetota
TAC
Val
>WENV183552992
OOBK01000174
413665
Actinomycetota
TTG
Gln
>WENV183553061
OOBK01000328
254857
Actinomycetota
CCG
Arg
>WENV183553121
OOBK01000637
254857
Actinomycetota
CCG
Arg
>WENV183552950
OOBK01000080
144700
Actinomycetota
CAT
Met
>WENV183553000
OOBK01000196
44942
Actinomycetota
TGA
Ser
>WENV183553360
OOBK01003083
144636
Actinomycetota
GAT
Ile
>WENV183552861
OOBK01000002
295695
Actinomycetota
CTC
Glu
>WENV183553207
OOBK01001253
295695
Actinomycetota
CTC
Glu
>WENV183552897
OOBK01000016
98279
Actinomycetota
GTA
Tyr
>WENV183552862
OOBK01000002
338148
Actinomycetota
CTG
Gln
>WENV183553208
OOBK01001253
338148
Actinomycetota
CTG
Gln
>WENV183553045
OOBK01000290
235148
Actinomycetota
GTT
Asn
>WENV183553082
OOBK01000411
235148
Actinomycetota
GTT
Asn
>WENV183553051
OOBK01000311
176456
Actinomycetota
TCT
Arg
>WENV183552908
OOBK01000019
144825
Actinomycetota
CAT
Met
>WENV183552941
OOBK01000062
145347
Actinomycetota
CAA
Leu
>WENV183552909
OOBK01000019
235348
Actinomycetota
CCT
Arg
>WENV183552899
OOBK01000016
16467
Actinomycetota
GCT
Ser
>WENV183553270
OOBK01001696
411554
Actinomycetota
CCC
Gly
>WENV183552864
OOBK01000002
113601
Actinomycetota
TAG
Leu
>WENV183552901
OOBK01000018
113601
Actinomycetota
TAG
Leu
>WENV183552891
OOBK01000013
144595
Actinomycetota
CAA
Leu
>WENV183553038
OOBK01000266
145343
Actinomycetota
GGG
Pro
>WENV183552958
OOBK01000092
235149
Actinomycetota
CCT
Arg
>WENV183553491
OOBK01007398
414234
Actinomycetota
CTG
Gln
>WENV183553005
OOBK01000207
145269
Actinomycetota
CAT
Met
>WENV183552863
OOBK01000002
235121
Actinomycetota
CGT
Thr
>WENV183552884
OOBK01000010
144635
Actinomycetota
TGG
Pro
>WENV183553579
OOBK01014055
61501
Actinomycetota
CAG
Leu
>WENV183552940
OOBK01000062
119485
Actinomycetota
TAA
Leu
>WENV183552887
OOBK01000011
80622
Actinomycetota
CAG
Leu
>WENV183552998
OOBK01000194
80622
Actinomycetota
CAG
Leu
>WENV183552869
OOBK01000004
16222
Actinomycetota
GAG
Leu
>WENV183553627
OOBK01022596
158513
Actinomycetota
TGG
Pro
>WENV183553046
OOBK01000290
235173
Actinomycetota
GGC
Ala
>WENV183552866
OOBK01000003
243162
Actinomycetota
GTT
Asn
>WENV183552911
OOBK01000022
144660
Actinomycetota
TAC
Val
>WENV183552903
OOBK01000018
278447
Actinomycetota
GTG
His
>WENV183552949
OOBK01000080
95593
Actinomycetota
>WENV183552963
OOBK01000103
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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