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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
111 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183554088
OOBM01000821
144612
Bacillota
TCT
Arg
>WENV183554166
OOBM01001283
144612
Bacillota
TCT
Arg
>WENV183554177
OOBM01001364
144612
Bacillota
TCT
Arg
>WENV183554193
OOBM01001480
144612
Bacillota
TCT
Arg
>WENV183553766
OOBM01000032
267556
Bacillota
TAC
Val
>WENV183553961
OOBM01000355
235098
Bacillota
GAC
Val
>WENV183554058
OOBM01000672
235098
Bacillota
GAC
Val
>WENV183554125
OOBM01000991
235098
Bacillota
GAC
Val
>WENV183554247
OOBM01001959
235098
Bacillota
GAC
Val
>WENV183554276
OOBM01002528
235098
Bacillota
GAC
Val
>WENV183554022
OOBM01000523
338152
Bacillota
TTC
Glu
>WENV183553976
OOBM01000397
340263
Bacillota
TTC
Glu
>WENV183554001
OOBM01000456
340263
Bacillota
TTC
Glu
>WENV183553923
OOBM01000269
148239
Bacillota
TCT
Arg
>WENV183553966
OOBM01000368
44854
Bacillota
TGA
Ser
>WENV183554026
OOBM01000542
44854
Bacillota
TGA
Ser
>WENV183554048
OOBM01000633
44854
Bacillota
TGA
Ser
>WENV183554053
OOBM01000649
44854
Bacillota
TGA
Ser
>WENV183553978
OOBM01000397
148348
Bacillota
GTC
Asp
>WENV183554123
OOBM01000968
59312
Bacillota
CAG
Leu
>WENV183553887
OOBM01000190
239080
Bacillota
CTG
Gln
>WENV183554499
OOBM01022288
235150
Bacillota
TGC
Ala
>WENV183554539
OOBM01030958
235137
Bacillota
TGC
Ala
>WENV183554251
OOBM01002006
182792
Bacillota
GTC
Asp
>WENV183554327
OOBM01003990
11034
Bacillota
GGA
Ser
>WENV183553979
OOBM01000397
239076
Bacillota
GAA
Phe
>WENV183553906
OOBM01000238
243646
Bacillota
GTT
Asn
>WENV183553907
OOBM01000238
235697
Bacillota
GTT
Asn
>WENV183554530
OOBM01027296
274189
Bacillota
TGT
Thr
>WENV183553993
OOBM01000454
340265
Bacillota
GCC
Gly
>WENV183554079
OOBM01000784
340265
Bacillota
GCC
Gly
>WENV183554227
OOBM01001853
16266
Bacillota
GCT
Ser
>WENV183554145
OOBM01001098
338149
Bacillota
CTC
Glu
>WENV183554331
OOBM01004104
338149
Bacillota
CTC
Glu
>WENV183554358
OOBM01005449
338149
Bacillota
CTC
Glu
>WENV183554244
OOBM01001937
245298
Bacillota
CGG
Pro
>WENV183554380
OOBM01006230
245298
Bacillota
CGG
Pro
>WENV183553816
OOBM01000082
37269
Bacillota
TGA
Ser
>WENV183554308
OOBM01003445
340131
Bacillota
GTT
Asn
>WENV183554215
OOBM01001665
155089
Bacillota
CAT
Met
>WENV183554433
OOBM01011006
162445
Bacillota
CAT
Met
>WENV183554292
OOBM01002904
152492
Bacillota
GGG
Pro
>WENV183554206
OOBM01001637
144599
Bacillota
GTC
Asp
>WENV183553801
OOBM01000066
100326
Bacillota
GTA
Tyr
>WENV183553924
OOBM01000269
144610
Bacillota
GTG
His
>WENV183554059
OOBM01000685
411547
Bacillota
CTG
Gln
>WENV183554138
OOBM01001060
411547
Bacillota
CTG
Gln
>WENV183554243
OOBM01001937
411547
Bacillota
CTG
Gln
>WENV183554270
OOBM01002391
411547
Bacillota
CTG
Gln
>WENV183554379
OOBM01006230
411547
Bacillota
CTG
Gln
>WENV183553920
OOBM01000259
147684
Bacillota
ACG
Arg
>WENV183554405
OOBM01008214
147684
Bacillota
ACG
Arg
>WENV183553967
OOBM01000368
4624
Bacillota
GCT
Ser
>WENV183554027
OOBM01000542
4624
Bacillota
GCT
Ser
>WENV183554049
OOBM01000633
4624
Bacillota
GCT
Ser
>WENV183554054
OOBM01000649
4624
Bacillota
GCT
Ser
>WENV183554585
OOBM01044546
411584
Bacillota
TCC
Gly
>WENV183554252
OOBM01002006
235095
Bacillota
GGT
Thr
>WENV183554584
OOBM01044546
341777
Bacillota
TTC
Glu
>WENV183554307
OOBM01003445
241471
Bacillota
TGC
Ala
>WENV183554274
OOBM01002471
419639
Bacillota
GCA
Cys
>WENV183553977
OOBM01000397
239079
Bacillota
TAC
Val
>WENV183553980
OOBM01000397
239079
Bacillota
TAC
Val
>WENV183554168
OOBM01001290
411549
Bacillota
TTG
Gln
>WENV183554171
OOBM01001319
411549
Bacillota
TTG
Gln
>WENV183554472
OOBM01016828
411549
Bacillota
TTG
Gln
>WENV183554066
OOBM01000714
148188
Bacillota
CCG
Arg
>WENV183554296
OOBM01003135
148188
Bacillota
CCG
Arg
>WENV183554302
OOBM01003346
148188
Bacillota
CCG
Arg
>WENV183554297
OOBM01003169
80612
Bacillota
GTA
Tyr
>WENV183554371
OOBM01005993
80612
Bacillota
GTA
Tyr
>WENV183554090
OOBM01000830
256380
Bacillota
>WENV183554101
OOBM01000888
235127
Bacillota
TTT
Lys
>WENV183553948
OOBM01000324
235124
Bacillota
TGG
Pro
>WENV183554319
OOBM01003734
235124
Bacillota
TGG
Pro
>WENV183554207
OOBM01001637
254433
Bacillota
TAC
Val
>WENV183554198
OOBM01001595
338129
Bacillota
TGT
Thr
>WENV183554147
OOBM01001103
144583
Bacillota
ACG
Arg
>WENV183554401
OOBM01008030
144672
Bacillota
TCT
Arg
>WENV183554082
OOBM01000786
419877
Bacillota
TCC
Gly
>WENV183554250
OOBM01002006
235171
Bacillota
CCA
Trp
>WENV183554383
OOBM01006755
235171
Bacillota
CCA
Trp
>WENV183553962
OOBM01000361
238974
Bacillota
GAA
Phe
>WENV183553956
OOBM01000344
144621
Bacillota
GTT
Asn
>WENV183553989
OOBM01000449
144621
Bacillota
GTT
Asn
>WENV183554114
OOBM01000916
144621
Bacillota
GTT
Asn
>WENV183554146
OOBM01001098
144621
Bacillota
GTT
Asn
>WENV183554332
OOBM01004104
144621
Bacillota
GTT
Asn
>WENV183554359
OOBM01005449
144621
Bacillota
GTT
Asn
>WENV183554187
OOBM01001429
58712
Bacillota
CAG
Leu
>WENV183554216
OOBM01001685
58712
Bacillota
CAG
Leu
>WENV183553949
OOBM01000329
245296
Bacillota
CCC
Gly
>WENV183554115
OOBM01000922
245296
Bacillota
CCC
Gly
>WENV183554232
OOBM01001905
245296
Bacillota
CCC
Gly
>WENV183553975
OOBM01000397
239078
Bacillota
TTT
Lys
>WENV183554346
OOBM01004838
344240
Bacillota
GCC
Gly
>WENV183553833
OOBM01000090
261708
Bacillota
CCA
Trp
>WENV183554278
OOBM01002557
242686
Bacillota
TGC
Ala
>WENV183554134
OOBM01001040
144594
Bacillota
CAC
Val
>WENV183554149
OOBM01001114
414486
Bacillota
CCC
Gly
>WENV183553827
OOBM01000087
272488
Bacillota
GAA
Phe
>WENV183554094
OOBM01000865
272488
Bacillota
GAA
Phe
>WENV183554073
OOBM01000752
114075
Bacillota
TAG
Leu
>WENV183554366
OOBM01005794
114075
Bacillota
TAG
Leu
>WENV183554415
OOBM01008607
238945
Bacillota
GCC
Gly
>WENV183554406
OOBM01008301
249259
Bacillota
GCC
Gly
>WENV183554387
OOBM01006866
273862
Bacillota
TGC
Ala
>WENV183554323
OOBM01003916
338131
Bacillota
GCC
Gly
>WENV183554061
OOBM01000701
338128
Bacillota
TTC
Glu
>WENV183554105
OOBM01000901
338128
Bacillota
TTC
Glu
>WENV183554160
OOBM01001193
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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