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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183558058
OOBQ01000758
309417
Bacillota
GGC
Ala
>WENV183558074
OOBQ01001475
144612
Bacillota
TCT
Arg
>WENV183558063
OOBQ01000811
304022
Bacillota
GCC
Gly
>WENV183558061
OOBQ01000782
235137
Bacillota
TGC
Ala
>WENV183558062
OOBQ01000811
235079
Bacillota
GAA
Phe
>WENV183558072
OOBQ01001426
144599
Bacillota
GTC
Asp
>WENV183558105
OOBQ01006430
80612
Bacillota
GTA
Tyr
>WENV183558073
OOBQ01001459
338129
Bacillota
TGT
Thr
>WENV183558096
OOBQ01003999
144583
Bacillota
ACG
Arg
>WENV183558094
OOBQ01003719
238974
Bacillota
GAA
Phe
>WENV183558099
OOBQ01005341
245296
Bacillota
CCC
Gly
>WENV183558104
OOBQ01006173
338128
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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