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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
98 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183558220
OOBR01000075
24650
Bacillota
TAA
Leu
>WENV183558228
OOBR01000087
196621
Bacillota
GTC
Asp
>WENV183558319
OOBR01000187
196621
Bacillota
GTC
Asp
>WENV183558890
OOBR01017519
202812
Bacillota
CAT
Met
>WENV183558304
OOBR01000178
309417
Bacillota
GGC
Ala
>WENV183558431
OOBR01000347
309417
Bacillota
GGC
Ala
>WENV183558756
OOBR01005335
309417
Bacillota
GGC
Ala
>WENV183558764
OOBR01006010
309417
Bacillota
GGC
Ala
>WENV183558509
OOBR01000645
37213
Bacillota
TGA
Ser
>WENV183558150
OOBR01000022
144612
Bacillota
TCT
Arg
>WENV183558481
OOBR01000486
144612
Bacillota
TCT
Arg
>WENV183558841
OOBR01011346
144612
Bacillota
TCT
Arg
>WENV183558236
OOBR01000092
235098
Bacillota
GAC
Val
>WENV183558556
OOBR01000914
235098
Bacillota
GAC
Val
>WENV183558736
OOBR01004316
235098
Bacillota
GAC
Val
>WENV183558611
OOBR01001538
338152
Bacillota
TTC
Glu
>WENV183558381
OOBR01000240
44854
Bacillota
TGA
Ser
>WENV183558387
OOBR01000248
44854
Bacillota
TGA
Ser
>WENV183558318
OOBR01000187
304022
Bacillota
GCC
Gly
>WENV183558320
OOBR01000187
304022
Bacillota
GCC
Gly
>WENV183558654
OOBR01002015
304022
Bacillota
GCC
Gly
>WENV183558658
OOBR01002015
304022
Bacillota
GCC
Gly
>WENV183558931
OOBR01023759
429443
Bacillota
GCA
Cys
>WENV183558157
OOBR01000029
59312
Bacillota
CAG
Leu
>WENV183558412
OOBR01000329
59312
Bacillota
CAG
Leu
>WENV183558865
OOBR01013492
338147
Bacillota
CTC
Glu
>WENV183558900
OOBR01018459
235150
Bacillota
TGC
Ala
>WENV183558947
OOBR01027809
235294
Bacillota
TGC
Ala
>WENV183558284
OOBR01000152
340802
Bacillota
TTG
Gln
>WENV183558568
OOBR01001017
293599
Bacillota
CTT
Lys
>WENV183558733
OOBR01004260
429429
Bacillota
CCA
Trp
>WENV183558518
OOBR01000669
313454
Bacillota
GAA
Phe
>WENV183558537
OOBR01000808
313454
Bacillota
GAA
Phe
>WENV183558147
OOBR01000021
11034
Bacillota
GGA
Ser
>WENV183558549
OOBR01000872
11034
Bacillota
GGA
Ser
>WENV183558655
OOBR01002015
235117
Bacillota
TAC
Val
>WENV183558283
OOBR01000152
156937
Bacillota
GTG
His
>WENV183558317
OOBR01000187
235079
Bacillota
GAA
Phe
>WENV183558657
OOBR01002015
235079
Bacillota
GAA
Phe
>WENV183558404
OOBR01000312
338149
Bacillota
CTC
Glu
>WENV183558293
OOBR01000163
245298
Bacillota
CGG
Pro
>WENV183558315
OOBR01000187
245298
Bacillota
CGG
Pro
>WENV183558155
OOBR01000027
155089
Bacillota
CAT
Met
>WENV183558164
OOBR01000032
173810
Bacillota
CAT
Met
>WENV183558784
OOBR01006997
152492
Bacillota
GGG
Pro
>WENV183558544
OOBR01000860
235078
Bacillota
TAC
Val
>WENV183558547
OOBR01000860
240017
Bacillota
GCC
Gly
>WENV183558126
OOBR01000011
411547
Bacillota
CTG
Gln
>WENV183558292
OOBR01000163
411547
Bacillota
CTG
Gln
>WENV183558314
OOBR01000187
411547
Bacillota
CTG
Gln
>WENV183558385
OOBR01000245
411547
Bacillota
CTG
Gln
>WENV183558166
OOBR01000032
147684
Bacillota
ACG
Arg
>WENV183558439
OOBR01000374
147684
Bacillota
ACG
Arg
>WENV183558382
OOBR01000240
4624
Bacillota
GCT
Ser
>WENV183558388
OOBR01000248
4624
Bacillota
GCT
Ser
>WENV183558981
OOBR01038213
412387
Bacillota
GCA
Cys
>WENV183558445
OOBR01000390
313164
Bacillota
TTT
Lys
>WENV183558148
OOBR01000022
235095
Bacillota
GGT
Thr
>WENV183558229
OOBR01000087
235095
Bacillota
GGT
Thr
>WENV183558587
OOBR01001283
235095
Bacillota
GGT
Thr
>WENV183558844
OOBR01011385
419639
Bacillota
GCA
Cys
>WENV183558291
OOBR01000163
411549
Bacillota
TTG
Gln
>WENV183558316
OOBR01000187
411549
Bacillota
TTG
Gln
>WENV183558988
OOBR01040832
59296
Bacillota
AAG
Leu
>WENV183558349
OOBR01000206
148188
Bacillota
CCG
Arg
>WENV183558561
OOBR01000945
148188
Bacillota
CCG
Arg
>WENV183558912
OOBR01021360
298639
Bacillota
GTT
Asn
>WENV183558499
OOBR01000534
80612
Bacillota
GTA
Tyr
>WENV183558690
OOBR01002692
80612
Bacillota
GTA
Tyr
>WENV183558278
OOBR01000147
256380
Bacillota
>WENV183558226
OOBR01000087
235124
Bacillota
TGG
Pro
>WENV183558571
OOBR01001066
235124
Bacillota
TGG
Pro
>WENV183558305
OOBR01000178
338129
Bacillota
TGT
Thr
>WENV183558364
OOBR01000223
338129
Bacillota
TGT
Thr
>WENV183558401
OOBR01000297
144583
Bacillota
ACG
Arg
>WENV183558485
OOBR01000508
144583
Bacillota
ACG
Arg
>WENV183558227
OOBR01000087
235171
Bacillota
CCA
Trp
>WENV183558405
OOBR01000312
144621
Bacillota
GTT
Asn
>WENV183558418
OOBR01000336
144621
Bacillota
GTT
Asn
>WENV183558451
OOBR01000415
144621
Bacillota
GTT
Asn
>WENV183558811
OOBR01008507
243098
Bacillota
GGT
Thr
>WENV183558436
OOBR01000367
58712
Bacillota
CAG
Leu
>WENV183558483
OOBR01000494
58712
Bacillota
CAG
Leu
>WENV183558501
OOBR01000552
58712
Bacillota
CAG
Leu
>WENV183558553
OOBR01000910
58712
Bacillota
CAG
Leu
>WENV183558448
OOBR01000399
245296
Bacillota
CCC
Gly
>WENV183558567
OOBR01001016
245296
Bacillota
CCC
Gly
>WENV183558728
OOBR01004103
344240
Bacillota
GCC
Gly
>WENV183558727
OOBR01004103
196632
Bacillota
GTC
Asp
>WENV183558936
OOBR01025978
299139
Bacillota
TGC
Ala
>WENV183558149
OOBR01000022
144594
Bacillota
CAC
Val
>WENV183558562
OOBR01000974
144594
Bacillota
CAC
Val
>WENV183558266
OOBR01000129
414486
Bacillota
CCC
Gly
>WENV183558724
OOBR01003745
114075
Bacillota
TAG
Leu
>WENV183558856
OOBR01012827
119513
Bacillota
CAA
Leu
>WENV183558348
OOBR01000206
338128
Bacillota
TTC
Glu
>WENV183558590
OOBR01001308
338128
Bacillota
TTC
Glu
>WENV183558896
OOBR01017945
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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