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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183563209
OOBX01000034
243647
Bacillota
TTT
Lys
>WENV183563218
OOBX01000034
243647
Bacillota
TTT
Lys
>WENV183563456
OOBX01000206
16842
Bacillota
CGA
Ser
>WENV183563205
OOBX01000034
235693
Bacillota
GGT
Thr
>WENV183563126
OOBX01000007
267649
Bacillota
TAC
Val
>WENV183563353
OOBX01000123
267649
Bacillota
TAC
Val
>WENV183563595
OOBX01000742
267649
Bacillota
TAC
Val
>WENV183563724
OOBX01007553
267649
Bacillota
TAC
Val
>WENV183563722
OOBX01007450
339928
Bacillota
CCG
Arg
>WENV183563702
OOBX01006543
418445
Bacillota
TCC
Gly
>WENV183563498
OOBX01000288
338152
Bacillota
TTC
Glu
>WENV183563741
OOBX01008728
338152
Bacillota
TTC
Glu
>WENV183563625
OOBX01001256
162296
Bacillota
CAT
Met
>WENV183563746
OOBX01008970
422863
Bacillota
GCA
Cys
>WENV183563389
OOBX01000137
340802
Bacillota
TTG
Gln
>WENV183563124
OOBX01000007
338143
Bacillota
CTC
Glu
>WENV183563125
OOBX01000007
338143
Bacillota
CTC
Glu
>WENV183563378
OOBX01000132
338143
Bacillota
CTC
Glu
>WENV183563761
OOBX01011051
256221
Bacillota
CTC
Glu
>WENV183563718
OOBX01007126
144668
Bacillota
GTC
Asp
>WENV183563723
OOBX01007553
144668
Bacillota
GTC
Asp
>WENV183563189
OOBX01000029
16834
Bacillota
GCT
Ser
>WENV183563188
OOBX01000029
268272
Bacillota
TGC
Ala
>WENV183563651
OOBX01002147
247057
Bacillota
TGC
Ala
>WENV183563081
OOBX01000003
114002
Bacillota
CAA
Leu
>WENV183563160
OOBX01000013
37437
Bacillota
TAA
Leu
>WENV183563201
OOBX01000034
243612
Bacillota
TAC
Val
>WENV183563211
OOBX01000034
243612
Bacillota
TAC
Val
>WENV183563215
OOBX01000034
243612
Bacillota
TAC
Val
>WENV183563686
OOBX01004924
144766
Bacillota
CAT
Met
>WENV183563321
OOBX01000097
37269
Bacillota
TGA
Ser
>WENV183563543
OOBX01000453
37269
Bacillota
TGA
Ser
>WENV183563127
OOBX01000007
155089
Bacillota
CAT
Met
>WENV183563727
OOBX01007553
169968
Bacillota
CAT
Met
>WENV183563480
OOBX01000247
162445
Bacillota
CAT
Met
>WENV183563482
OOBX01000247
162445
Bacillota
CAT
Met
>WENV183563416
OOBX01000171
152492
Bacillota
GGG
Pro
>WENV183563076
OOBX01000003
147135
Bacillota
ACG
Arg
>WENV183563388
OOBX01000137
144610
Bacillota
GTG
His
>WENV183563080
OOBX01000003
342895
Bacillota
CAT
Met
>WENV183563664
OOBX01002961
412387
Bacillota
GCA
Cys
>WENV183563611
OOBX01000941
18852
Bacillota
GCT
Ser
>WENV183563157
OOBX01000013
250349
Bacillota
GAA
Phe
>WENV183563451
OOBX01000206
250349
Bacillota
GAA
Phe
>WENV183563687
OOBX01004924
144962
Bacillota
CAT
Met
>WENV183563120
OOBX01000007
59296
Bacillota
AAG
Leu
>WENV183563608
OOBX01000905
235127
Bacillota
TTT
Lys
>WENV183563644
OOBX01001698
235127
Bacillota
TTT
Lys
>WENV183563156
OOBX01000013
235197
Bacillota
GTC
Asp
>WENV183563329
OOBX01000106
235197
Bacillota
GTC
Asp
>WENV183563641
OOBX01001698
147674
Bacillota
TCT
Arg
>WENV183563693
OOBX01004924
235288
Bacillota
TAC
Val
>WENV183563688
OOBX01004924
163753
Bacillota
TGG
Pro
>WENV183563216
OOBX01000034
243613
Bacillota
GTG
His
>WENV183563271
OOBX01000063
144672
Bacillota
TCT
Arg
>WENV183563206
OOBX01000034
152491
Bacillota
CAT
Met
>WENV183563681
OOBX01004924
144762
Bacillota
TCT
Arg
>WENV183563202
OOBX01000034
273029
Bacillota
TGT
Thr
>WENV183563455
OOBX01000206
178024
Bacillota
TCT
Arg
>WENV183563387
OOBX01000137
157635
Bacillota
TCT
Arg
>WENV183563161
OOBX01000013
413657
Bacillota
CCC
Gly
>WENV183563372
OOBX01000130
272488
Bacillota
GAA
Phe
>WENV183563607
OOBX01000905
272488
Bacillota
GAA
Phe
>WENV183563753
OOBX01009465
272488
Bacillota
GAA
Phe
>WENV183563373
OOBX01000130
238945
Bacillota
GCC
Gly
>WENV183563507
OOBX01000310
238945
Bacillota
GCC
Gly
>WENV183563509
OOBX01000310
238945
Bacillota
GCC
Gly
>WENV183563217
OOBX01000034
343027
Bacillota
TTG
Gln
>WENV183563180
OOBX01000022
338131
Bacillota
GCC
Gly
>WENV183563701
OOBX01006543
338207
Bacillota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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