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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183574902
OOCI01000106
235097
Bacteroidota
TTT
Lys
>WENV183574968
OOCI01000161
235097
Bacteroidota
TTT
Lys
>WENV183575127
OOCI01000427
235097
Bacteroidota
TTT
Lys
>WENV183575272
OOCI01000908
235097
Bacteroidota
TTT
Lys
>WENV183574898
OOCI01000104
95987
Bacteroidota
CAA
Leu
>WENV183575293
OOCI01001002
95987
Bacteroidota
CAA
Leu
>WENV183575775
OOCI01007705
95987
Bacteroidota
CAA
Leu
>WENV183575194
OOCI01000641
339412
Bacteroidota
GGT
Thr
>WENV183576279
OOCI01063935
235102
Bacteroidota
CGT
Thr
>WENV183575495
OOCI01002588
237796
Bacteroidota
CGT
Thr
>WENV183575547
OOCI01003106
243025
Bacteroidota
CAT
Met
>WENV183575278
OOCI01000939
338155
Bacteroidota
CTC
Glu
>WENV183575258
OOCI01000851
126965
Bacteroidota
GGG
Pro
>WENV183575314
OOCI01001094
153993
Bacteroidota
GAT
Ile
>WENV183575944
OOCI01014371
58715
Bacteroidota
GAG
Leu
>WENV183575037
OOCI01000241
24174
Bacteroidota
GCT
Ser
>WENV183575071
OOCI01000296
413663
Bacteroidota
CTG
Gln
>WENV183575439
OOCI01001978
413663
Bacteroidota
CTG
Gln
>WENV183575081
OOCI01000326
415410
Bacteroidota
TTG
Gln
>WENV183575166
OOCI01000546
415410
Bacteroidota
TTG
Gln
>WENV183575921
OOCI01012817
415410
Bacteroidota
TTG
Gln
>WENV183575033
OOCI01000230
136244
Bacteroidota
TAC
Val
>WENV183575457
OOCI01002107
136244
Bacteroidota
TAC
Val
>WENV183576128
OOCI01032611
237797
Bacteroidota
CCA
Trp
>WENV183575552
OOCI01003158
144695
Bacteroidota
CAT
Met
>WENV183575135
OOCI01000458
412479
Bacteroidota
TTG
Gln
>WENV183574852
OOCI01000047
147147
Bacteroidota
GTG
His
>WENV183575326
OOCI01001171
147147
Bacteroidota
GTG
His
>WENV183575774
OOCI01007698
147147
Bacteroidota
GTG
His
>WENV183575004
OOCI01000193
155123
Bacteroidota
GTT
Asn
>WENV183575403
OOCI01001585
338124
Bacteroidota
CCG
Arg
>WENV183576115
OOCI01030794
238121
Bacteroidota
CTT
Lys
>WENV183576034
OOCI01022484
126641
Bacteroidota
TAC
Val
>WENV183574764
OOCI01000009
338132
Bacteroidota
GCA
Cys
>WENV183575247
OOCI01000808
338132
Bacteroidota
GCA
Cys
>WENV183575163
OOCI01000539
37076
Bacteroidota
TAA
Leu
>WENV183575423
OOCI01001882
37076
Bacteroidota
TAA
Leu
>WENV183575634
OOCI01004329
37076
Bacteroidota
TAA
Leu
>WENV183574799
OOCI01000022
301449
Bacteroidota
CGG
Pro
>WENV183575828
OOCI01009390
301449
Bacteroidota
CGG
Pro
>WENV183574863
OOCI01000055
144933
Bacteroidota
TCT
Arg
>WENV183574829
OOCI01000039
235207
Bacteroidota
CAT
Met
>WENV183576072
OOCI01025492
144659
Bacteroidota
GTG
His
>WENV183575682
OOCI01005169
144596
Bacteroidota
GGC
Ala
>WENV183574999
OOCI01000187
80607
Bacteroidota
GTA
Tyr
>WENV183575894
OOCI01011385
80607
Bacteroidota
GTA
Tyr
>WENV183575762
OOCI01007352
16999
Bacteroidota
GGA
Ser
>WENV183575438
OOCI01001976
147148
Bacteroidota
CAT
Met
>WENV183574765
OOCI01000009
52358
Bacteroidota
TGA
Ser
>WENV183575790
OOCI01008530
52358
Bacteroidota
TGA
Ser
>WENV183576044
OOCI01024044
154643
Bacteroidota
CAT
Met
>WENV183574967
OOCI01000157
415558
Bacteroidota
TTG
Gln
>WENV183575930
OOCI01013013
175704
Bacteroidota
TGC
Ala
>WENV183575560
OOCI01003307
95559
Bacteroidota
TAG
Leu
>WENV183574858
OOCI01000053
419272
Bacteroidota
CTG
Gln
>WENV183574886
OOCI01000091
144655
Bacteroidota
GGC
Ala
>WENV183574847
OOCI01000043
263771
Bacteroidota
CTT
Lys
>WENV183576317
OOCI01081168
338164
Bacteroidota
TTC
Glu
>WENV183575911
OOCI01012302
95875
Bacteroidota
TAG
Leu
>WENV183574797
OOCI01000022
44852
Bacteroidota
TAA
Leu
>WENV183575120
OOCI01000414
19528
Bacteroidota
GGA
Ser
>WENV183575601
OOCI01003801
196394
Bacteroidota
GTC
Asp
>WENV183574857
OOCI01000053
132360
Bacteroidota
GGG
Pro
>WENV183575134
OOCI01000448
425638
Bacteroidota
CTG
Gln
>WENV183575382
OOCI01001474
425638
Bacteroidota
CTG
Gln
>WENV183575400
OOCI01001558
353927
Bacteroidota
TTC
Glu
>WENV183575277
OOCI01000939
23696
Bacteroidota
GCT
Ser
>WENV183575941
OOCI01014159
414426
Bacteroidota
CTG
Gln
>WENV183575248
OOCI01000817
16224
Bacteroidota
GGA
Ser
>WENV183575515
OOCI01002731
151960
Bacteroidota
GGC
Ala
>WENV183575301
OOCI01001042
16220
Bacteroidota
GGA
Ser
>WENV183574827
OOCI01000037
338125
Bacteroidota
CCT
Arg
>WENV183574966
OOCI01000151
338125
Bacteroidota
CCT
Arg
>WENV183575476
OOCI01002343
338125
Bacteroidota
CCT
Arg
>WENV183575963
OOCI01016033
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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