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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183578988
OOCM01000024
95987
Bacteroidota
CAA
Leu
>WENV183579039
OOCM01000067
339412
Bacteroidota
GGT
Thr
>WENV183579359
OOCM01000691
235102
Bacteroidota
CGT
Thr
>WENV183579767
OOCM01003659
144657
Bacteroidota
CGG
Pro
>WENV183579302
OOCM01000510
243025
Bacteroidota
CAT
Met
>WENV183579573
OOCM01001621
243025
Bacteroidota
CAT
Met
>WENV183580259
OOCM01040627
153993
Bacteroidota
GAT
Ile
>WENV183579276
OOCM01000482
343138
Bacteroidota
CCT
Arg
>WENV183580011
OOCM01011278
58715
Bacteroidota
GAG
Leu
>WENV183579818
OOCM01004550
46165
Bacteroidota
TGA
Ser
>WENV183579571
OOCM01001613
338486
Bacteroidota
CAT
Met
>WENV183579669
OOCM01002378
338486
Bacteroidota
CAT
Met
>WENV183579779
OOCM01003806
338486
Bacteroidota
CAT
Met
>WENV183579527
OOCM01001333
413663
Bacteroidota
CTG
Gln
>WENV183579843
OOCM01005109
413663
Bacteroidota
CTG
Gln
>WENV183579660
OOCM01002250
136244
Bacteroidota
TAC
Val
>WENV183579040
OOCM01000067
237797
Bacteroidota
CCA
Trp
>WENV183579217
OOCM01000338
59689
Bacteroidota
CAG
Leu
>WENV183579033
OOCM01000064
436206
Bacteroidota
TTG
Gln
>WENV183579445
OOCM01000902
436206
Bacteroidota
TTG
Gln
>WENV183579894
OOCM01006203
20893
Bacteroidota
GGA
Ser
>WENV183579077
OOCM01000096
412479
Bacteroidota
TTG
Gln
>WENV183578952
OOCM01000005
147147
Bacteroidota
GTG
His
>WENV183578953
OOCM01000005
147147
Bacteroidota
GTG
His
>WENV183579110
OOCM01000152
155123
Bacteroidota
GTT
Asn
>WENV183580295
OOCM01050474
344692
Bacteroidota
GGT
Thr
>WENV183579305
OOCM01000532
338124
Bacteroidota
CCG
Arg
>WENV183579673
OOCM01002461
238121
Bacteroidota
CTT
Lys
>WENV183580124
OOCM01020110
126641
Bacteroidota
TAC
Val
>WENV183579138
OOCM01000196
338132
Bacteroidota
GCA
Cys
>WENV183579208
OOCM01000317
338132
Bacteroidota
GCA
Cys
>WENV183579220
OOCM01000350
338132
Bacteroidota
GCA
Cys
>WENV183579716
OOCM01003067
338132
Bacteroidota
GCA
Cys
>WENV183579849
OOCM01005193
338132
Bacteroidota
GCA
Cys
>WENV183579271
OOCM01000462
45423
Bacteroidota
TGA
Ser
>WENV183579617
OOCM01001855
37076
Bacteroidota
TAA
Leu
>WENV183579819
OOCM01004550
58714
Bacteroidota
CAA
Leu
>WENV183579158
OOCM01000215
301449
Bacteroidota
CGG
Pro
>WENV183579464
OOCM01001015
301449
Bacteroidota
CGG
Pro
>WENV183579149
OOCM01000204
144933
Bacteroidota
TCT
Arg
>WENV183579756
OOCM01003562
144933
Bacteroidota
TCT
Arg
>WENV183578960
OOCM01000011
144656
Bacteroidota
GTG
His
>WENV183579082
OOCM01000103
235207
Bacteroidota
CAT
Met
>WENV183579519
OOCM01001273
144659
Bacteroidota
GTG
His
>WENV183579128
OOCM01000183
235180
Bacteroidota
CCA
Trp
>WENV183579568
OOCM01001572
144596
Bacteroidota
GGC
Ala
>WENV183579349
OOCM01000662
80607
Bacteroidota
GTA
Tyr
>WENV183579316
OOCM01000546
344769
Bacteroidota
CTC
Glu
>WENV183579735
OOCM01003261
344769
Bacteroidota
CTC
Glu
>WENV183579652
OOCM01002189
16999
Bacteroidota
GGA
Ser
>WENV183579370
OOCM01000717
80614
Bacteroidota
>WENV183579103
OOCM01000136
52358
Bacteroidota
TGA
Ser
>WENV183579122
OOCM01000170
52358
Bacteroidota
TGA
Ser
>WENV183579646
OOCM01002134
52358
Bacteroidota
TGA
Ser
>WENV183579116
OOCM01000157
154643
Bacteroidota
CAT
Met
>WENV183580063
OOCM01014619
175704
Bacteroidota
TGC
Ala
>WENV183579610
OOCM01001790
144590
Bacteroidota
GTT
Asn
>WENV183579088
OOCM01000114
95559
Bacteroidota
TAG
Leu
>WENV183579020
OOCM01000053
419272
Bacteroidota
CTG
Gln
>WENV183579084
OOCM01000105
144655
Bacteroidota
GGC
Ala
>WENV183579275
OOCM01000482
338164
Bacteroidota
TTC
Glu
>WENV183578978
OOCM01000018
95875
Bacteroidota
TAG
Leu
>WENV183579120
OOCM01000165
139743
Bacteroidota
GGG
Pro
>WENV183579446
OOCM01000905
139743
Bacteroidota
GGG
Pro
>WENV183579441
OOCM01000886
240012
Bacteroidota
CCC
Gly
>WENV183580020
OOCM01011830
240012
Bacteroidota
CCC
Gly
>WENV183579075
OOCM01000094
44852
Bacteroidota
TAA
Leu
>WENV183580377
OOCM01081818
280513
Bacteroidota
TTT
Lys
>WENV183580397
OOCM01092365
150485
Bacteroidota
GTT
Asn
>WENV183579393
OOCM01000800
411550
Bacteroidota
CTG
Gln
>WENV183579481
OOCM01001102
196394
Bacteroidota
GTC
Asp
>WENV183579817
OOCM01004547
196394
Bacteroidota
GTC
Asp
>WENV183579076
OOCM01000095
425638
Bacteroidota
CTG
Gln
>WENV183579113
OOCM01000154
353927
Bacteroidota
TTC
Glu
>WENV183579607
OOCM01001785
185921
Bacteroidota
GTC
Asp
>WENV183579207
OOCM01000317
23696
Bacteroidota
GCT
Ser
>WENV183579070
OOCM01000089
414426
Bacteroidota
CTG
Gln
>WENV183578961
OOCM01000011
16224
Bacteroidota
GGA
Ser
>WENV183579536
OOCM01001369
151960
Bacteroidota
GGC
Ala
>WENV183579021
OOCM01000053
16220
Bacteroidota
GGA
Ser
>WENV183579026
OOCM01000057
338125
Bacteroidota
CCT
Arg
>WENV183579344
OOCM01000635
338125
Bacteroidota
CCT
Arg
>WENV183579134
OOCM01000192
235129
Bacteroidota
GCC
Gly
>WENV183578986
OOCM01000024
313363
Bacteroidota
GAA
Phe
>WENV183579005
OOCM01000033
313363
Bacteroidota
GAA
Phe
>WENV183580242
OOCM01037855
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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