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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
73 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183580434
OOCN01000017
235097
Bacteroidota
TTT
Lys
>WENV183580624
OOCN01000164
235097
Bacteroidota
TTT
Lys
>WENV183580710
OOCN01000273
235097
Bacteroidota
TTT
Lys
>WENV183581228
OOCN01006893
235097
Bacteroidota
TTT
Lys
>WENV183581296
OOCN01013545
235102
Bacteroidota
CGT
Thr
>WENV183580950
OOCN01001171
144657
Bacteroidota
CGG
Pro
>WENV183580591
OOCN01000132
343138
Bacteroidota
CCT
Arg
>WENV183580676
OOCN01000224
58715
Bacteroidota
GAG
Leu
>WENV183580883
OOCN01000814
46165
Bacteroidota
TGA
Ser
>WENV183581108
OOCN01002668
95618
Bacteroidota
TAG
Leu
>WENV183580581
OOCN01000122
338486
Bacteroidota
CAT
Met
>WENV183580635
OOCN01000171
338486
Bacteroidota
CAT
Met
>WENV183580651
OOCN01000193
59689
Bacteroidota
CAG
Leu
>WENV183580981
OOCN01001337
436206
Bacteroidota
TTG
Gln
>WENV183580561
OOCN01000102
436206
Bacteroidota
TTG
Gln
>WENV183580650
OOCN01000193
20893
Bacteroidota
GGA
Ser
>WENV183581349
OOCN01022614
235182
Bacteroidota
>WENV183581347
OOCN01022117
338124
Bacteroidota
CCG
Arg
>WENV183580459
OOCN01000032
235203
Bacteroidota
TTT
Lys
>WENV183580884
OOCN01000814
238121
Bacteroidota
CTT
Lys
>WENV183580885
OOCN01000814
238121
Bacteroidota
CTT
Lys
>WENV183581038
OOCN01001783
126641
Bacteroidota
TAC
Val
>WENV183580604
OOCN01000148
338132
Bacteroidota
GCA
Cys
>WENV183580627
OOCN01000166
338132
Bacteroidota
GCA
Cys
>WENV183580899
OOCN01000890
338132
Bacteroidota
GCA
Cys
>WENV183580543
OOCN01000086
58714
Bacteroidota
CAA
Leu
>WENV183580449
OOCN01000025
301449
Bacteroidota
CGG
Pro
>WENV183581136
OOCN01003181
144933
Bacteroidota
TCT
Arg
>WENV183580758
OOCN01000390
144656
Bacteroidota
GTG
His
>WENV183580628
OOCN01000167
235207
Bacteroidota
CAT
Met
>WENV183580609
OOCN01000152
144659
Bacteroidota
GTG
His
>WENV183580951
OOCN01001171
235180
Bacteroidota
CCA
Trp
>WENV183581080
OOCN01002160
144596
Bacteroidota
GGC
Ala
>WENV183580796
OOCN01000497
80607
Bacteroidota
GTA
Tyr
>WENV183580919
OOCN01000989
80607
Bacteroidota
GTA
Tyr
>WENV183580943
OOCN01001123
80607
Bacteroidota
GTA
Tyr
>WENV183580610
OOCN01000152
80614
Bacteroidota
>WENV183580929
OOCN01001018
52358
Bacteroidota
TGA
Ser
>WENV183581245
OOCN01008230
52358
Bacteroidota
TGA
Ser
>WENV183581156
OOCN01003626
95559
Bacteroidota
TAG
Leu
>WENV183581303
OOCN01014721
95559
Bacteroidota
TAG
Leu
>WENV183581248
OOCN01008348
419272
Bacteroidota
CTG
Gln
>WENV183580956
OOCN01001208
144655
Bacteroidota
GGC
Ala
>WENV183580590
OOCN01000132
338164
Bacteroidota
TTC
Glu
>WENV183580774
OOCN01000432
95875
Bacteroidota
TAG
Leu
>WENV183581348
OOCN01022362
338314
Bacteroidota
CCT
Arg
>WENV183580441
OOCN01000021
139743
Bacteroidota
GGG
Pro
>WENV183580504
OOCN01000060
139743
Bacteroidota
GGG
Pro
>WENV183580988
OOCN01001369
139743
Bacteroidota
GGG
Pro
>WENV183581029
OOCN01001665
139743
Bacteroidota
GGG
Pro
>WENV183581085
OOCN01002265
139743
Bacteroidota
GGG
Pro
>WENV183580670
OOCN01000221
240012
Bacteroidota
CCC
Gly
>WENV183580688
OOCN01000256
44852
Bacteroidota
TAA
Leu
>WENV183581211
OOCN01005750
44852
Bacteroidota
TAA
Leu
>WENV183580839
OOCN01000639
147439
Bacteroidota
TCT
Arg
>WENV183581277
OOCN01010961
150485
Bacteroidota
GTT
Asn
>WENV183581278
OOCN01010961
150485
Bacteroidota
GTT
Asn
>WENV183581279
OOCN01010961
150485
Bacteroidota
GTT
Asn
>WENV183581147
OOCN01003355
411550
Bacteroidota
CTG
Gln
>WENV183580440
OOCN01000021
425638
Bacteroidota
CTG
Gln
>WENV183580450
OOCN01000026
425638
Bacteroidota
CTG
Gln
>WENV183580792
OOCN01000487
425638
Bacteroidota
CTG
Gln
>WENV183580620
OOCN01000162
239647
Bacteroidota
TTT
Lys
>WENV183580860
OOCN01000735
239647
Bacteroidota
TTT
Lys
>WENV183580767
OOCN01000412
185921
Bacteroidota
GTC
Asp
>WENV183581283
OOCN01011567
139062
Bacteroidota
TGG
Pro
>WENV183580829
OOCN01000605
23696
Bacteroidota
GCT
Ser
>WENV183581384
OOCN01034492
16224
Bacteroidota
GGA
Ser
>WENV183581396
OOCN01037558
16220
Bacteroidota
GGA
Ser
>WENV183580612
OOCN01000153
235129
Bacteroidota
GCC
Gly
>WENV183580685
OOCN01000253
411629
Bacteroidota
TTG
Gln
>WENV183581104
OOCN01002633
411629
Bacteroidota
TTG
Gln
>WENV183581167
OOCN01004154
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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