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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
135 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183581852
OOCP01000285
235097
Bacteroidota
TTT
Lys
>WENV183581938
OOCP01000404
235097
Bacteroidota
TTT
Lys
>WENV183582505
OOCP01002250
235097
Bacteroidota
TTT
Lys
>WENV183583042
OOCP01008927
235097
Bacteroidota
TTT
Lys
>WENV183583126
OOCP01011190
235097
Bacteroidota
TTT
Lys
>WENV183583466
OOCP01032737
235097
Bacteroidota
TTT
Lys
>WENV183582331
OOCP01001386
235102
Bacteroidota
CGT
Thr
>WENV183583306
OOCP01019208
235102
Bacteroidota
CGT
Thr
>WENV183582201
OOCP01000929
267954
Bacteroidota
GCC
Gly
>WENV183582246
OOCP01001060
267954
Bacteroidota
GCC
Gly
>WENV183581538
OOCP01000001
146761
Bacteroidota
GAT
Ile
>WENV183582775
OOCP01004687
144657
Bacteroidota
CGG
Pro
>WENV183581550
OOCP01000005
126966
Bacteroidota
TAC
Val
>WENV183582157
OOCP01000830
338155
Bacteroidota
CTC
Glu
>WENV183583268
OOCP01016950
338155
Bacteroidota
CTC
Glu
>WENV183581589
OOCP01000019
126965
Bacteroidota
GGG
Pro
>WENV183582034
OOCP01000554
343138
Bacteroidota
CCT
Arg
>WENV183581571
OOCP01000011
58715
Bacteroidota
GAG
Leu
>WENV183581664
OOCP01000068
46165
Bacteroidota
TGA
Ser
>WENV183581551
OOCP01000005
24174
Bacteroidota
GCT
Ser
>WENV183581599
OOCP01000022
338486
Bacteroidota
CAT
Met
>WENV183581600
OOCP01000022
338486
Bacteroidota
CAT
Met
>WENV183582059
OOCP01000609
338486
Bacteroidota
CAT
Met
>WENV183582217
OOCP01000982
338486
Bacteroidota
CAT
Met
>WENV183581696
OOCP01000094
59689
Bacteroidota
CAG
Leu
>WENV183582259
OOCP01001122
436206
Bacteroidota
TTG
Gln
>WENV183582261
OOCP01001125
436206
Bacteroidota
TTG
Gln
>WENV183582432
OOCP01001879
436206
Bacteroidota
TTG
Gln
>WENV183581688
OOCP01000091
20893
Bacteroidota
GGA
Ser
>WENV183581850
OOCP01000284
20893
Bacteroidota
GGA
Ser
>WENV183583349
OOCP01021443
412479
Bacteroidota
TTG
Gln
>WENV183581625
OOCP01000037
155123
Bacteroidota
GTT
Asn
>WENV183581647
OOCP01000050
338124
Bacteroidota
CCG
Arg
>WENV183583407
OOCP01025793
338124
Bacteroidota
CCG
Arg
>WENV183582001
OOCP01000500
235203
Bacteroidota
TTT
Lys
>WENV183581572
OOCP01000011
238121
Bacteroidota
CTT
Lys
>WENV183581573
OOCP01000011
238121
Bacteroidota
CTT
Lys
>WENV183581665
OOCP01000068
238121
Bacteroidota
CTT
Lys
>WENV183581666
OOCP01000068
238121
Bacteroidota
CTT
Lys
>WENV183581813
OOCP01000242
126641
Bacteroidota
TAC
Val
>WENV183582748
OOCP01004440
126641
Bacteroidota
TAC
Val
>WENV183583336
OOCP01020943
126641
Bacteroidota
TAC
Val
>WENV183581779
OOCP01000188
338132
Bacteroidota
GCA
Cys
>WENV183581845
OOCP01000268
338132
Bacteroidota
GCA
Cys
>WENV183581991
OOCP01000473
338132
Bacteroidota
GCA
Cys
>WENV183581992
OOCP01000473
338132
Bacteroidota
GCA
Cys
>WENV183582018
OOCP01000530
338132
Bacteroidota
GCA
Cys
>WENV183582043
OOCP01000569
338132
Bacteroidota
GCA
Cys
>WENV183582353
OOCP01001442
338132
Bacteroidota
GCA
Cys
>WENV183582685
OOCP01003782
338132
Bacteroidota
GCA
Cys
>WENV183582787
OOCP01004858
338132
Bacteroidota
GCA
Cys
>WENV183582993
OOCP01007802
338132
Bacteroidota
GCA
Cys
>WENV183583138
OOCP01011806
338132
Bacteroidota
GCA
Cys
>WENV183581667
OOCP01000068
45423
Bacteroidota
TGA
Ser
>WENV183582842
OOCP01005444
193809
Bacteroidota
CAT
Met
>WENV183581812
OOCP01000238
58714
Bacteroidota
CAA
Leu
>WENV183581984
OOCP01000466
301449
Bacteroidota
CGG
Pro
>WENV183583066
OOCP01010028
301449
Bacteroidota
CGG
Pro
>WENV183583296
OOCP01018475
301449
Bacteroidota
CGG
Pro
>WENV183582213
OOCP01000947
144933
Bacteroidota
TCT
Arg
>WENV183581652
OOCP01000058
144933
Bacteroidota
TCT
Arg
>WENV183582340
OOCP01001400
144933
Bacteroidota
TCT
Arg
>WENV183583023
OOCP01008422
144933
Bacteroidota
TCT
Arg
>WENV183581541
OOCP01000001
144656
Bacteroidota
GTG
His
>WENV183583205
OOCP01014460
144656
Bacteroidota
GTG
His
>WENV183583514
OOCP01043537
144656
Bacteroidota
GTG
His
>WENV183583515
OOCP01043580
144656
Bacteroidota
GTG
His
>WENV183581886
OOCP01000321
235207
Bacteroidota
CAT
Met
>WENV183582484
OOCP01002108
235207
Bacteroidota
CAT
Met
>WENV183583077
OOCP01010359
235207
Bacteroidota
CAT
Met
>WENV183583301
OOCP01018909
235207
Bacteroidota
CAT
Met
>WENV183581727
OOCP01000124
235207
Bacteroidota
CAT
Met
>WENV183581843
OOCP01000267
235207
Bacteroidota
CAT
Met
>WENV183581825
OOCP01000251
143169
Bacteroidota
GGG
Pro
>WENV183581893
OOCP01000329
143169
Bacteroidota
GGG
Pro
>WENV183582581
OOCP01002849
143169
Bacteroidota
GGG
Pro
>WENV183582703
OOCP01003991
143169
Bacteroidota
GGG
Pro
>WENV183583041
OOCP01008870
143169
Bacteroidota
GGG
Pro
>WENV183581827
OOCP01000253
144659
Bacteroidota
GTG
His
>WENV183582011
OOCP01000515
235180
Bacteroidota
CCA
Trp
>WENV183581945
OOCP01000412
144596
Bacteroidota
GGC
Ala
>WENV183581637
OOCP01000044
80607
Bacteroidota
GTA
Tyr
>WENV183582406
OOCP01001729
80607
Bacteroidota
GTA
Tyr
>WENV183582497
OOCP01002181
80607
Bacteroidota
GTA
Tyr
>WENV183582383
OOCP01001567
113604
Bacteroidota
>WENV183581768
OOCP01000173
16999
Bacteroidota
GGA
Ser
>WENV183582536
OOCP01002529
80614
Bacteroidota
>WENV183582892
OOCP01005972
144590
Bacteroidota
GTT
Asn
>WENV183582912
OOCP01006351
95559
Bacteroidota
TAG
Leu
>WENV183583308
OOCP01019363
95559
Bacteroidota
TAG
Leu
>WENV183582680
OOCP01003695
144655
Bacteroidota
GGC
Ala
>WENV183582035
OOCP01000554
338164
Bacteroidota
TTC
Glu
>WENV183582036
OOCP01000554
338164
Bacteroidota
TTC
Glu
>WENV183581859
OOCP01000296
95875
Bacteroidota
TAG
Leu
>WENV183582350
OOCP01001425
95875
Bacteroidota
TAG
Leu
>WENV183582161
OOCP01000835
151121
Bacteroidota
CAT
Met
>WENV183581960
OOCP01000432
139743
Bacteroidota
GGG
Pro
>WENV183581601
OOCP01000022
240012
Bacteroidota
CCC
Gly
>WENV183582559
OOCP01002673
240012
Bacteroidota
CCC
Gly
>WENV183581885
OOCP01000319
44852
Bacteroidota
TAA
Leu
>WENV183581927
OOCP01000380
44852
Bacteroidota
TAA
Leu
>WENV183581967
OOCP01000440
44852
Bacteroidota
TAA
Leu
>WENV183582047
OOCP01000575
44852
Bacteroidota
TAA
Leu
>WENV183582087
OOCP01000662
147439
Bacteroidota
TCT
Arg
>WENV183583335
OOCP01020805
147439
Bacteroidota
TCT
Arg
>WENV183582232
OOCP01001028
280513
Bacteroidota
TTT
Lys
>WENV183582499
OOCP01002190
280513
Bacteroidota
TTT
Lys
>WENV183582125
OOCP01000744
150485
Bacteroidota
GTT
Asn
>WENV183582646
OOCP01003396
150485
Bacteroidota
GTT
Asn
>WENV183583058
OOCP01009470
150485
Bacteroidota
GTT
Asn
>WENV183581699
OOCP01000098
411550
Bacteroidota
CTG
Gln
>WENV183581700
OOCP01000098
411550
Bacteroidota
CTG
Gln
>WENV183582195
OOCP01000913
19528
Bacteroidota
GGA
Ser
>WENV183583373
OOCP01023148
196394
Bacteroidota
GTC
Asp
>WENV183581674
OOCP01000076
425638
Bacteroidota
CTG
Gln
>WENV183581826
OOCP01000251
425638
Bacteroidota
CTG
Gln
>WENV183582555
OOCP01002640
425638
Bacteroidota
CTG
Gln
>WENV183582444
OOCP01001938
239647
Bacteroidota
TTT
Lys
>WENV183581899
OOCP01000335
19317
Bacteroidota
GGA
Ser
>WENV183581636
OOCP01000043
185921
Bacteroidota
GTC
Asp
>WENV183581728
OOCP01000126
185921
Bacteroidota
GTC
Asp
>WENV183582020
OOCP01000530
23696
Bacteroidota
GCT
Ser
>WENV183582156
OOCP01000830
23696
Bacteroidota
GCT
Ser
>WENV183582015
OOCP01000520
56823
Bacteroidota
TGA
Ser
>WENV183582124
OOCP01000740
56823
Bacteroidota
TGA
Ser
>WENV183582922
OOCP01006486
56823
Bacteroidota
TGA
Ser
>WENV183583282
OOCP01017659
56823
Bacteroidota
TGA
Ser
>WENV183582026
OOCP01000548
16224
Bacteroidota
GGA
Ser
>WENV183583015
OOCP01008327
16220
Bacteroidota
GGA
Ser
>WENV183582780
OOCP01004743
338125
Bacteroidota
CCT
Arg
>WENV183583197
OOCP01013893
338125
Bacteroidota
CCT
Arg
>WENV183581569
OOCP01000011
235129
Bacteroidota
GCC
Gly
>WENV183581695
OOCP01000094
235129
Bacteroidota
GCC
Gly
>WENV183582113
OOCP01000717
235129
Bacteroidota
GCC
Gly
>WENV183582647
OOCP01003397
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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