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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183585098
OOCR01001026
144612
Bacillota
TCT
Arg
>WENV183584830
OOCR01000135
267556
Bacillota
TAC
Val
>WENV183585001
OOCR01000497
235098
Bacillota
GAC
Val
>WENV183585030
OOCR01000665
235098
Bacillota
GAC
Val
>WENV183585301
OOCR01008243
338152
Bacillota
TTC
Glu
>WENV183585044
OOCR01000733
340263
Bacillota
TTC
Glu
>WENV183584812
OOCR01000116
148239
Bacillota
TCT
Arg
>WENV183584953
OOCR01000390
44854
Bacillota
TGA
Ser
>WENV183584997
OOCR01000489
44854
Bacillota
TGA
Ser
>WENV183585014
OOCR01000563
44854
Bacillota
TGA
Ser
>WENV183585300
OOCR01008243
235154
Bacillota
GTT
Asn
>WENV183584965
OOCR01000403
148348
Bacillota
GTC
Asp
>WENV183585141
OOCR01001595
239080
Bacillota
CTG
Gln
>WENV183584993
OOCR01000477
238910
Bacillota
CTT
Lys
>WENV183585421
OOCR01027601
235150
Bacillota
TGC
Ala
>WENV183585370
OOCR01018416
235137
Bacillota
TGC
Ala
>WENV183585072
OOCR01000858
11034
Bacillota
GGA
Ser
>WENV183585134
OOCR01001396
11034
Bacillota
GGA
Ser
>WENV183585311
OOCR01009060
11034
Bacillota
GGA
Ser
>WENV183584960
OOCR01000403
239076
Bacillota
GAA
Phe
>WENV183584966
OOCR01000403
239076
Bacillota
GAA
Phe
>WENV183584813
OOCR01000116
156937
Bacillota
GTG
His
>WENV183585009
OOCR01000526
235697
Bacillota
GTT
Asn
>WENV183585200
OOCR01002576
235079
Bacillota
GAA
Phe
>WENV183585050
OOCR01000761
340265
Bacillota
GCC
Gly
>WENV183585213
OOCR01002814
340265
Bacillota
GCC
Gly
>WENV183585337
OOCR01013243
16266
Bacillota
GCT
Ser
>WENV183585344
OOCR01014005
338149
Bacillota
CTC
Glu
>WENV183585153
OOCR01001726
245298
Bacillota
CGG
Pro
>WENV183585291
OOCR01007456
245298
Bacillota
CGG
Pro
>WENV183585059
OOCR01000785
37269
Bacillota
TGA
Ser
>WENV183585183
OOCR01002360
155089
Bacillota
CAT
Met
>WENV183585422
OOCR01027962
28968
Bacillota
GGA
Ser
>WENV183585445
OOCR01036346
162445
Bacillota
CAT
Met
>WENV183585373
OOCR01019015
152492
Bacillota
GGG
Pro
>WENV183585154
OOCR01001731
100326
Bacillota
GTA
Tyr
>WENV183585124
OOCR01001240
411547
Bacillota
CTG
Gln
>WENV183585152
OOCR01001726
411547
Bacillota
CTG
Gln
>WENV183585174
OOCR01002162
411547
Bacillota
CTG
Gln
>WENV183585290
OOCR01007456
411547
Bacillota
CTG
Gln
>WENV183585273
OOCR01006034
147684
Bacillota
ACG
Arg
>WENV183584954
OOCR01000390
4624
Bacillota
GCT
Ser
>WENV183584998
OOCR01000489
4624
Bacillota
GCT
Ser
>WENV183585015
OOCR01000563
4624
Bacillota
GCT
Ser
>WENV183585122
OOCR01001230
235095
Bacillota
GGT
Thr
>WENV183585054
OOCR01000780
419639
Bacillota
GCA
Cys
>WENV183585045
OOCR01000733
239079
Bacillota
TAC
Val
>WENV183585053
OOCR01000778
411549
Bacillota
TTG
Gln
>WENV183584949
OOCR01000384
148188
Bacillota
CCG
Arg
>WENV183585226
OOCR01003414
80612
Bacillota
GTA
Tyr
>WENV183584853
OOCR01000186
256380
Bacillota
>WENV183585198
OOCR01002529
235124
Bacillota
TGG
Pro
>WENV183585266
OOCR01005856
235124
Bacillota
TGG
Pro
>WENV183584876
OOCR01000216
149274
Bacillota
>WENV183584992
OOCR01000473
144583
Bacillota
ACG
Arg
>WENV183585047
OOCR01000739
238974
Bacillota
GAA
Phe
>WENV183585032
OOCR01000668
144621
Bacillota
GTT
Asn
>WENV183585219
OOCR01003096
277200
Bacillota
GGC
Ala
>WENV183585033
OOCR01000670
58712
Bacillota
CAG
Leu
>WENV183584914
OOCR01000305
245296
Bacillota
CCC
Gly
>WENV183585244
OOCR01004409
245296
Bacillota
CCC
Gly
>WENV183585345
OOCR01014005
272992
Bacillota
CTT
Lys
>WENV183585043
OOCR01000733
239078
Bacillota
TTT
Lys
>WENV183585062
OOCR01000801
344240
Bacillota
GCC
Gly
>WENV183585210
OOCR01002706
242686
Bacillota
TGC
Ala
>WENV183585181
OOCR01002311
144594
Bacillota
CAC
Val
>WENV183585233
OOCR01003531
144594
Bacillota
CAC
Val
>WENV183585131
OOCR01001375
414486
Bacillota
CCC
Gly
>WENV183585157
OOCR01001777
272488
Bacillota
GAA
Phe
>WENV183585012
OOCR01000544
114075
Bacillota
TAG
Leu
>WENV183585455
OOCR01043031
119513
Bacillota
CAA
Leu
>WENV183585235
OOCR01003690
238945
Bacillota
GCC
Gly
>WENV183585201
OOCR01002576
249259
Bacillota
GCC
Gly
>WENV183585356
OOCR01016223
273862
Bacillota
TGC
Ala
>WENV183584951
OOCR01000384
338128
Bacillota
TTC
Glu
>WENV183584976
OOCR01000424
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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