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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183589862
OOCW01009766
235146
Actinomycetota
CGT
Thr
>WENV183589788
OOCW01006358
235347
Actinomycetota
GGC
Ala
>WENV183589789
OOCW01006358
235347
Actinomycetota
GGC
Ala
>WENV183589042
OOCW01000007
37070
Actinomycetota
CGA
Ser
>WENV183590030
OOCW01044449
273786
Actinomycetota
CGT
Thr
>WENV183589812
OOCW01007297
411601
Actinomycetota
CCC
Gly
>WENV183589945
OOCW01018977
23370
Actinomycetota
GCT
Ser
>WENV183589216
OOCW01000179
235174
Actinomycetota
TGC
Ala
>WENV183589791
OOCW01006455
121510
Actinomycetota
TAA
Leu
>WENV183589362
OOCW01000578
145423
Actinomycetota
TCT
Arg
>WENV183589696
OOCW01003113
44862
Actinomycetota
CGA
Ser
>WENV183589051
OOCW01000012
198659
Actinomycetota
TAC
Val
>WENV183589714
OOCW01003511
254857
Actinomycetota
CCG
Arg
>WENV183589037
OOCW01000007
44942
Actinomycetota
TGA
Ser
>WENV183589035
OOCW01000007
98279
Actinomycetota
GTA
Tyr
>WENV183589191
OOCW01000128
338148
Actinomycetota
CTG
Gln
>WENV183589320
OOCW01000410
235148
Actinomycetota
GTT
Asn
>WENV183589892
OOCW01012311
144825
Actinomycetota
CAT
Met
>WENV183589179
OOCW01000105
145347
Actinomycetota
CAA
Leu
>WENV183589043
OOCW01000007
16467
Actinomycetota
GCT
Ser
>WENV183589217
OOCW01000179
411554
Actinomycetota
CCC
Gly
>WENV183589032
OOCW01000007
113601
Actinomycetota
TAG
Leu
>WENV183589902
OOCW01013566
144595
Actinomycetota
CAA
Leu
>WENV183589029
OOCW01000006
145343
Actinomycetota
GGG
Pro
>WENV183589328
OOCW01000445
235149
Actinomycetota
CCT
Arg
>WENV183589270
OOCW01000281
145269
Actinomycetota
CAT
Met
>WENV183589031
OOCW01000007
235121
Actinomycetota
CGT
Thr
>WENV183589180
OOCW01000105
144635
Actinomycetota
TGG
Pro
>WENV183589178
OOCW01000105
119485
Actinomycetota
TAA
Leu
>WENV183589872
OOCW01010283
17009
Actinomycetota
GAG
Leu
>WENV183589214
OOCW01000179
80622
Actinomycetota
CAG
Leu
>WENV183589319
OOCW01000410
235173
Actinomycetota
GGC
Ala
>WENV183589875
OOCW01010517
95593
Actinomycetota
>WENV183589884
OOCW01011245
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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