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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
82 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183590297
OOCX01000173
235146
Actinomycetota
CGT
Thr
>WENV183590572
OOCX01000968
235347
Actinomycetota
GGC
Ala
>WENV183590735
OOCX01002331
235153
Actinomycetota
CCT
Arg
>WENV183590455
OOCX01000516
144589
Actinomycetota
ACG
Arg
>WENV183590443
OOCX01000477
16400
Actinomycetota
GAG
Leu
>WENV183590485
OOCX01000644
37070
Actinomycetota
CGA
Ser
>WENV183590167
OOCX01000057
201717
Actinomycetota
CTT
Lys
>WENV183590504
OOCX01000694
201717
Actinomycetota
CTT
Lys
>WENV183590754
OOCX01002701
235194
Actinomycetota
GTG
His
>WENV183590148
OOCX01000043
273786
Actinomycetota
CGT
Thr
>WENV183590545
OOCX01000842
158720
Actinomycetota
ACG
Arg
>WENV183590877
OOCX01004647
245301
Actinomycetota
GCC
Gly
>WENV183590239
OOCX01000113
411601
Actinomycetota
CCC
Gly
>WENV183590319
OOCX01000202
144826
Actinomycetota
GGG
Pro
>WENV183590391
OOCX01000325
23370
Actinomycetota
GCT
Ser
>WENV183590423
OOCX01000428
338239
Actinomycetota
TTC
Glu
>WENV183590453
OOCX01000510
338239
Actinomycetota
TTC
Glu
>WENV183590695
OOCX01001953
16219
Actinomycetota
GCT
Ser
>WENV183590177
OOCX01000070
235174
Actinomycetota
TGC
Ala
>WENV183590068
OOCX01000003
235101
Actinomycetota
TTT
Lys
>WENV183590314
OOCX01000199
121510
Actinomycetota
TAA
Leu
>WENV183590438
OOCX01000456
145423
Actinomycetota
TCT
Arg
>WENV183590436
OOCX01000452
44855
Actinomycetota
TGA
Ser
>WENV183590379
OOCX01000302
145345
Actinomycetota
TAC
Val
>WENV183590296
OOCX01000173
235199
Actinomycetota
CAC
Val
>WENV183590661
OOCX01001577
44862
Actinomycetota
CGA
Ser
>WENV183590075
OOCX01000006
198659
Actinomycetota
TAC
Val
>WENV183590252
OOCX01000126
413665
Actinomycetota
TTG
Gln
>WENV183590430
OOCX01000437
254857
Actinomycetota
CCG
Arg
>WENV183590528
OOCX01000769
254857
Actinomycetota
CCG
Arg
>WENV183590067
OOCX01000003
113703
Actinomycetota
TAG
Leu
>WENV183590390
OOCX01000325
144700
Actinomycetota
CAT
Met
>WENV183590347
OOCX01000248
44942
Actinomycetota
TGA
Ser
>WENV183590796
OOCX01003284
144636
Actinomycetota
GAT
Ile
>WENV183590798
OOCX01003284
144636
Actinomycetota
GAT
Ile
>WENV183590651
OOCX01001515
45147
Actinomycetota
CGA
Ser
>WENV183590064
OOCX01000003
295695
Actinomycetota
CTC
Glu
>WENV183590439
OOCX01000467
295695
Actinomycetota
CTC
Glu
>WENV183590152
OOCX01000043
98279
Actinomycetota
GTA
Tyr
>WENV183590065
OOCX01000003
338148
Actinomycetota
CTG
Gln
>WENV183590226
OOCX01000105
235148
Actinomycetota
GTT
Asn
>WENV183590228
OOCX01000105
235148
Actinomycetota
GTT
Asn
>WENV183590645
OOCX01001422
235148
Actinomycetota
GTT
Asn
>WENV183590458
OOCX01000533
53078
Actinomycetota
GGA
Ser
>WENV183590301
OOCX01000181
237792
Actinomycetota
CCT
Arg
>WENV183590447
OOCX01000495
113702
Actinomycetota
TAA
Leu
>WENV183590189
OOCX01000081
144825
Actinomycetota
CAT
Met
>WENV183590254
OOCX01000127
145347
Actinomycetota
CAA
Leu
>WENV183590955
OOCX01007033
338139
Actinomycetota
GTT
Asn
>WENV183590190
OOCX01000081
235348
Actinomycetota
CCT
Arg
>WENV183590461
OOCX01000539
237794
Actinomycetota
CCG
Arg
>WENV183590147
OOCX01000043
16467
Actinomycetota
GCT
Ser
>WENV183590283
OOCX01000149
411554
Actinomycetota
CCC
Gly
>WENV183590355
OOCX01000280
411554
Actinomycetota
CCC
Gly
>WENV183590149
OOCX01000043
113601
Actinomycetota
TAG
Leu
>WENV183590315
OOCX01000199
144595
Actinomycetota
CAA
Leu
>WENV183590574
OOCX01000968
144595
Actinomycetota
CAA
Leu
>WENV183590107
OOCX01000022
145343
Actinomycetota
GGG
Pro
>WENV183590076
OOCX01000006
235149
Actinomycetota
CCT
Arg
>WENV183590270
OOCX01000137
51286
Actinomycetota
TGA
Ser
>WENV183590868
OOCX01004441
414234
Actinomycetota
CTG
Gln
>WENV183590573
OOCX01000968
163764
Actinomycetota
TGG
Pro
>WENV183590180
OOCX01000074
145269
Actinomycetota
CAT
Met
>WENV183590066
OOCX01000003
235121
Actinomycetota
CGT
Thr
>WENV183590255
OOCX01000127
144635
Actinomycetota
TGG
Pro
>WENV183590616
OOCX01001231
61501
Actinomycetota
CAG
Leu
>WENV183590197
OOCX01000088
119485
Actinomycetota
TAA
Leu
>WENV183590238
OOCX01000113
80622
Actinomycetota
CAG
Leu
>WENV183590282
OOCX01000149
80622
Actinomycetota
CAG
Leu
>WENV183590354
OOCX01000280
80622
Actinomycetota
CAG
Leu
>WENV183590440
OOCX01000467
356597
Actinomycetota
CTG
Gln
>WENV183590273
OOCX01000141
16222
Actinomycetota
GAG
Leu
>WENV183590211
OOCX01000096
163948
Actinomycetota
CAT
Met
>WENV183590227
OOCX01000105
235173
Actinomycetota
GGC
Ala
>WENV183590253
OOCX01000126
235173
Actinomycetota
GGC
Ala
>WENV183590609
OOCX01001204
235173
Actinomycetota
GGC
Ala
>WENV183590433
OOCX01000447
243162
Actinomycetota
GTT
Asn
>WENV183590343
OOCX01000244
144660
Actinomycetota
TAC
Val
>WENV183590104
OOCX01000022
278447
Actinomycetota
GTG
His
>WENV183590608
OOCX01001204
267574
Actinomycetota
CAC
Val
>WENV183590389
OOCX01000325
95593
Actinomycetota
>WENV183590351
OOCX01000265
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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