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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183597133
OODF01000003
235097
Bacteroidota
TTT
Lys
>WENV183597203
OODF01000043
235097
Bacteroidota
TTT
Lys
>WENV183597206
OODF01000046
235097
Bacteroidota
TTT
Lys
>WENV183597288
OODF01000144
235097
Bacteroidota
TTT
Lys
>WENV183597295
OODF01000158
235097
Bacteroidota
TTT
Lys
>WENV183597432
OODF01000441
235097
Bacteroidota
TTT
Lys
>WENV183597622
OODF01001533
235102
Bacteroidota
CGT
Thr
>WENV183597903
OODF01011217
144657
Bacteroidota
CGG
Pro
>WENV183597810
OODF01006340
243025
Bacteroidota
CAT
Met
>WENV183597137
OODF01000003
126965
Bacteroidota
GGG
Pro
>WENV183597207
OODF01000047
24174
Bacteroidota
GCT
Ser
>WENV183597429
OODF01000423
338486
Bacteroidota
CAT
Met
>WENV183597501
OODF01000649
338486
Bacteroidota
CAT
Met
>WENV183597238
OODF01000081
136244
Bacteroidota
TAC
Val
>WENV183597431
OODF01000437
136244
Bacteroidota
TAC
Val
>WENV183597645
OODF01001763
59689
Bacteroidota
CAG
Leu
>WENV183597185
OODF01000028
436206
Bacteroidota
TTG
Gln
>WENV183597316
OODF01000195
436206
Bacteroidota
TTG
Gln
>WENV183597746
OODF01003766
20893
Bacteroidota
GGA
Ser
>WENV183597702
OODF01002589
155123
Bacteroidota
GTT
Asn
>WENV183597344
OODF01000257
145504
Bacteroidota
TGT
Thr
>WENV183597355
OODF01000273
338124
Bacteroidota
CCG
Arg
>WENV183597181
OODF01000026
338132
Bacteroidota
GCA
Cys
>WENV183597298
OODF01000167
338132
Bacteroidota
GCA
Cys
>WENV183597406
OODF01000376
338132
Bacteroidota
GCA
Cys
>WENV183597455
OODF01000510
338132
Bacteroidota
GCA
Cys
>WENV183597497
OODF01000641
338132
Bacteroidota
GCA
Cys
>WENV183597915
OODF01012298
338132
Bacteroidota
GCA
Cys
>WENV183597366
OODF01000282
235165
Bacteroidota
CCA
Trp
>WENV183597337
OODF01000243
301449
Bacteroidota
CGG
Pro
>WENV183597496
OODF01000637
301449
Bacteroidota
CGG
Pro
>WENV183597607
OODF01001264
301449
Bacteroidota
CGG
Pro
>WENV183597560
OODF01000902
303954
Bacteroidota
GCC
Gly
>WENV183597561
OODF01000902
303954
Bacteroidota
GCC
Gly
>WENV183597274
OODF01000130
136207
Bacteroidota
TAC
Val
>WENV183597275
OODF01000130
136207
Bacteroidota
TAC
Val
>WENV183597130
OODF01000001
144656
Bacteroidota
GTG
His
>WENV183597278
OODF01000133
144656
Bacteroidota
GTG
His
>WENV183597273
OODF01000123
235207
Bacteroidota
CAT
Met
>WENV183597283
OODF01000135
235207
Bacteroidota
CAT
Met
>WENV183598046
OODF01043758
235207
Bacteroidota
CAT
Met
>WENV183597619
OODF01001388
144659
Bacteroidota
GTG
His
>WENV183597540
OODF01000848
144596
Bacteroidota
GGC
Ala
>WENV183597881
OODF01009788
80607
Bacteroidota
GTA
Tyr
>WENV183597331
OODF01000218
16999
Bacteroidota
GGA
Ser
>WENV183597609
OODF01001288
80614
Bacteroidota
>WENV183597204
OODF01000044
52358
Bacteroidota
TGA
Ser
>WENV183597719
OODF01002924
52358
Bacteroidota
TGA
Ser
>WENV183597763
OODF01004316
52358
Bacteroidota
TGA
Ser
>WENV183597309
OODF01000183
95559
Bacteroidota
TAG
Leu
>WENV183597187
OODF01000029
419272
Bacteroidota
CTG
Gln
>WENV183597215
OODF01000053
144655
Bacteroidota
GGC
Ala
>WENV183597625
OODF01001613
144639
Bacteroidota
GGC
Ala
>WENV183597791
OODF01005694
338164
Bacteroidota
TTC
Glu
>WENV183597790
OODF01005694
338164
Bacteroidota
TTC
Glu
>WENV183597536
OODF01000831
95875
Bacteroidota
TAG
Leu
>WENV183597186
OODF01000029
139743
Bacteroidota
GGG
Pro
>WENV183597348
OODF01000262
139743
Bacteroidota
GGG
Pro
>WENV183597354
OODF01000272
139743
Bacteroidota
GGG
Pro
>WENV183597412
OODF01000391
139743
Bacteroidota
GGG
Pro
>WENV183597423
OODF01000408
139743
Bacteroidota
GGG
Pro
>WENV183597671
OODF01002088
139743
Bacteroidota
GGG
Pro
>WENV183597883
OODF01009847
139743
Bacteroidota
GGG
Pro
>WENV183597848
OODF01007868
240012
Bacteroidota
CCC
Gly
>WENV183597222
OODF01000062
44852
Bacteroidota
TAA
Leu
>WENV183597769
OODF01004879
147439
Bacteroidota
TCT
Arg
>WENV183597159
OODF01000010
150485
Bacteroidota
GTT
Asn
>WENV183597160
OODF01000010
150485
Bacteroidota
GTT
Asn
>WENV183597948
OODF01015686
411550
Bacteroidota
CTG
Gln
>WENV183597164
OODF01000012
425638
Bacteroidota
CTG
Gln
>WENV183597310
OODF01000184
425638
Bacteroidota
CTG
Gln
>WENV183597424
OODF01000408
425638
Bacteroidota
CTG
Gln
>WENV183597372
OODF01000294
239647
Bacteroidota
TTT
Lys
>WENV183597569
OODF01000971
353927
Bacteroidota
TTC
Glu
>WENV183597741
OODF01003605
185921
Bacteroidota
GTC
Asp
>WENV183598008
OODF01032017
23696
Bacteroidota
GCT
Ser
>WENV183597457
OODF01000512
16224
Bacteroidota
GGA
Ser
>WENV183597747
OODF01003786
16224
Bacteroidota
GGA
Ser
>WENV183597787
OODF01005626
151960
Bacteroidota
GGC
Ala
>WENV183597188
OODF01000029
16220
Bacteroidota
GGA
Ser
>WENV183597624
OODF01001564
338125
Bacteroidota
CCT
Arg
>WENV183597396
OODF01000357
235129
Bacteroidota
GCC
Gly
>WENV183597398
OODF01000357
235129
Bacteroidota
GCC
Gly
>WENV183597598
OODF01001155
235129
Bacteroidota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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