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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
72 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183605714
OODN01000005
235146
Actinomycetota
CGT
Thr
>WENV183605926
OODN01000129
235347
Actinomycetota
GGC
Ala
>WENV183605927
OODN01000129
235347
Actinomycetota
GGC
Ala
>WENV183605934
OODN01000137
235153
Actinomycetota
CCT
Arg
>WENV183605913
OODN01000109
144589
Actinomycetota
ACG
Arg
>WENV183605914
OODN01000109
144589
Actinomycetota
ACG
Arg
>WENV183605780
OODN01000024
37070
Actinomycetota
CGA
Ser
>WENV183605718
OODN01000005
201717
Actinomycetota
CTT
Lys
>WENV183605929
OODN01000129
158720
Actinomycetota
ACG
Arg
>WENV183605930
OODN01000129
158720
Actinomycetota
ACG
Arg
>WENV183605879
OODN01000081
305322
Actinomycetota
TGC
Ala
>WENV183605882
OODN01000082
305322
Actinomycetota
TGC
Ala
>WENV183605786
OODN01000027
245301
Actinomycetota
GCC
Gly
>WENV183605788
OODN01000027
245301
Actinomycetota
GCC
Gly
>WENV183605789
OODN01000027
245301
Actinomycetota
GCC
Gly
>WENV183605911
OODN01000106
411601
Actinomycetota
CCC
Gly
>WENV183606016
OODN01000259
144826
Actinomycetota
GGG
Pro
>WENV183605842
OODN01000055
23370
Actinomycetota
GCT
Ser
>WENV183605881
OODN01000082
174149
Actinomycetota
GAT
Ile
>WENV183605848
OODN01000058
235101
Actinomycetota
TTT
Lys
>WENV183605795
OODN01000032
121510
Actinomycetota
TAA
Leu
>WENV183606134
OODN01000634
153948
Actinomycetota
GGG
Pro
>WENV183606014
OODN01000257
44855
Actinomycetota
TGA
Ser
>WENV183605723
OODN01000005
235199
Actinomycetota
CAC
Val
>WENV183605843
OODN01000055
44862
Actinomycetota
CGA
Ser
>WENV183605712
OODN01000005
313386
Actinomycetota
CGT
Thr
>WENV183605725
OODN01000007
198659
Actinomycetota
TAC
Val
>WENV183605925
OODN01000129
413665
Actinomycetota
TTG
Gln
>WENV183605719
OODN01000005
254857
Actinomycetota
CCG
Arg
>WENV183606120
OODN01000537
254857
Actinomycetota
CCG
Arg
>WENV183605841
OODN01000055
144700
Actinomycetota
CAT
Met
>WENV183605775
OODN01000024
44942
Actinomycetota
TGA
Ser
>WENV183605824
OODN01000049
144636
Actinomycetota
GAT
Ile
>WENV183605826
OODN01000049
144636
Actinomycetota
GAT
Ile
>WENV183605906
OODN01000099
243671
Actinomycetota
CTC
Glu
>WENV183606005
OODN01000244
98279
Actinomycetota
GTA
Tyr
>WENV183605800
OODN01000035
338148
Actinomycetota
CTG
Gln
>WENV183605907
OODN01000099
338148
Actinomycetota
CTG
Gln
>WENV183605748
OODN01000013
235148
Actinomycetota
GTT
Asn
>WENV183605750
OODN01000013
235148
Actinomycetota
GTT
Asn
>WENV183605892
OODN01000088
235148
Actinomycetota
GTT
Asn
>WENV183605893
OODN01000088
235148
Actinomycetota
GTT
Asn
>WENV183605894
OODN01000088
235148
Actinomycetota
GTT
Asn
>WENV183605716
OODN01000005
53078
Actinomycetota
GGA
Ser
>WENV183605809
OODN01000041
176456
Actinomycetota
TCT
Arg
>WENV183605915
OODN01000111
144825
Actinomycetota
CAT
Met
>WENV183605731
OODN01000011
145347
Actinomycetota
CAA
Leu
>WENV183606094
OODN01000451
338139
Actinomycetota
GTT
Asn
>WENV183605916
OODN01000111
235348
Actinomycetota
CCT
Arg
>WENV183605781
OODN01000024
16467
Actinomycetota
GCT
Ser
>WENV183606093
OODN01000449
411554
Actinomycetota
CCC
Gly
>WENV183605713
OODN01000005
113601
Actinomycetota
TAG
Leu
>WENV183605802
OODN01000035
113601
Actinomycetota
TAG
Leu
>WENV183605796
OODN01000032
144595
Actinomycetota
CAA
Leu
>WENV183605756
OODN01000013
145343
Actinomycetota
GGG
Pro
>WENV183605873
OODN01000077
235149
Actinomycetota
CCT
Arg
>WENV183605844
OODN01000056
414234
Actinomycetota
CTG
Gln
>WENV183605928
OODN01000129
163764
Actinomycetota
TGG
Pro
>WENV183605950
OODN01000149
145269
Actinomycetota
CAT
Met
>WENV183605801
OODN01000035
235121
Actinomycetota
CGT
Thr
>WENV183605732
OODN01000011
144635
Actinomycetota
TGG
Pro
>WENV183605730
OODN01000011
119485
Actinomycetota
TAA
Leu
>WENV183605872
OODN01000075
17009
Actinomycetota
GAG
Leu
>WENV183605910
OODN01000106
80622
Actinomycetota
CAG
Leu
>WENV183605946
OODN01000147
158513
Actinomycetota
TGG
Pro
>WENV183605787
OODN01000027
412834
Actinomycetota
GCA
Cys
>WENV183605749
OODN01000013
235173
Actinomycetota
GGC
Ala
>WENV183605880
OODN01000081
235173
Actinomycetota
GGC
Ala
>WENV183605729
OODN01000009
144660
Actinomycetota
TAC
Val
>WENV183605805
OODN01000041
278447
Actinomycetota
GTG
His
>WENV183605840
OODN01000055
95593
Actinomycetota
>WENV183605724
OODN01000006
144823
Actinomycetota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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