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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
75 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183607835
OODP01000030
235097
Bacteroidota
TTT
Lys
>WENV183607851
OODP01000049
235097
Bacteroidota
TTT
Lys
>WENV183607871
OODP01000086
235097
Bacteroidota
TTT
Lys
>WENV183607850
OODP01000047
235102
Bacteroidota
CGT
Thr
>WENV183608407
OODP01011942
144657
Bacteroidota
CGG
Pro
>WENV183607778
OODP01000001
243025
Bacteroidota
CAT
Met
>WENV183608021
OODP01000362
338155
Bacteroidota
CTC
Glu
>WENV183608280
OODP01003953
338155
Bacteroidota
CTC
Glu
>WENV183608289
OODP01004399
153993
Bacteroidota
GAT
Ile
>WENV183608016
OODP01000337
343138
Bacteroidota
CCT
Arg
>WENV183608414
OODP01012333
58715
Bacteroidota
GAG
Leu
>WENV183608188
OODP01001579
46165
Bacteroidota
TGA
Ser
>WENV183608012
OODP01000299
17323
Bacteroidota
GGA
Ser
>WENV183607943
OODP01000200
338486
Bacteroidota
CAT
Met
>WENV183608194
OODP01001679
415410
Bacteroidota
TTG
Gln
>WENV183608056
OODP01000509
59689
Bacteroidota
CAG
Leu
>WENV183607775
OODP01000001
80835
Bacteroidota
GTA
Tyr
>WENV183608139
OODP01001124
80835
Bacteroidota
GTA
Tyr
>WENV183607799
OODP01000008
344692
Bacteroidota
GGT
Thr
>WENV183608452
OODP01017470
235182
Bacteroidota
>WENV183607798
OODP01000008
341950
Bacteroidota
>WENV183607846
OODP01000043
338124
Bacteroidota
CCG
Arg
>WENV183608189
OODP01001579
238121
Bacteroidota
CTT
Lys
>WENV183608239
OODP01002712
126641
Bacteroidota
TAC
Val
>WENV183607801
OODP01000010
338132
Bacteroidota
GCA
Cys
>WENV183607970
OODP01000259
338132
Bacteroidota
GCA
Cys
>WENV183608017
OODP01000341
338132
Bacteroidota
GCA
Cys
>WENV183608210
OODP01002103
338132
Bacteroidota
GCA
Cys
>WENV183608190
OODP01001579
45423
Bacteroidota
TGA
Ser
>WENV183608338
OODP01006223
58714
Bacteroidota
CAA
Leu
>WENV183608144
OODP01001151
144933
Bacteroidota
TCT
Arg
>WENV183607907
OODP01000135
149691
Bacteroidota
GTT
Asn
>WENV183607908
OODP01000135
149691
Bacteroidota
GTT
Asn
>WENV183607852
OODP01000050
144656
Bacteroidota
GTG
His
>WENV183608058
OODP01000523
235207
Bacteroidota
CAT
Met
>WENV183608192
OODP01001629
235207
Bacteroidota
CAT
Met
>WENV183608258
OODP01003366
235207
Bacteroidota
CAT
Met
>WENV183608322
OODP01005907
235207
Bacteroidota
CAT
Met
>WENV183608193
OODP01001659
144659
Bacteroidota
GTG
His
>WENV183608057
OODP01000511
144596
Bacteroidota
GGC
Ala
>WENV183608092
OODP01000762
144596
Bacteroidota
GGC
Ala
>WENV183607853
OODP01000051
80607
Bacteroidota
GTA
Tyr
>WENV183607916
OODP01000148
80607
Bacteroidota
GTA
Tyr
>WENV183608035
OODP01000433
80607
Bacteroidota
GTA
Tyr
>WENV183608052
OODP01000496
80607
Bacteroidota
GTA
Tyr
>WENV183607834
OODP01000029
16999
Bacteroidota
GGA
Ser
>WENV183608070
OODP01000610
16999
Bacteroidota
GGA
Ser
>WENV183608102
OODP01000879
80614
Bacteroidota
>WENV183607783
OODP01000001
154643
Bacteroidota
CAT
Met
>WENV183607918
OODP01000149
95559
Bacteroidota
TAG
Leu
>WENV183607817
OODP01000014
144655
Bacteroidota
GGC
Ala
>WENV183608015
OODP01000337
338164
Bacteroidota
TTC
Glu
>WENV183608064
OODP01000532
95875
Bacteroidota
TAG
Leu
>WENV183608484
OODP01023173
151121
Bacteroidota
CAT
Met
>WENV183608165
OODP01001359
338314
Bacteroidota
CCT
Arg
>WENV183608069
OODP01000582
240012
Bacteroidota
CCC
Gly
>WENV183607823
OODP01000016
44852
Bacteroidota
TAA
Leu
>WENV183607939
OODP01000199
44852
Bacteroidota
TAA
Leu
>WENV183608089
OODP01000753
44852
Bacteroidota
TAA
Leu
>WENV183608014
OODP01000330
147439
Bacteroidota
TCT
Arg
>WENV183608005
OODP01000284
150485
Bacteroidota
GTT
Asn
>WENV183608006
OODP01000284
150485
Bacteroidota
GTT
Asn
>WENV183608007
OODP01000284
150485
Bacteroidota
GTT
Asn
>WENV183608142
OODP01001140
150485
Bacteroidota
GTT
Asn
>WENV183608143
OODP01001140
150485
Bacteroidota
GTT
Asn
>WENV183608027
OODP01000385
411550
Bacteroidota
CTG
Gln
>WENV183608251
OODP01003039
239647
Bacteroidota
TTT
Lys
>WENV183608352
OODP01007501
239647
Bacteroidota
TTT
Lys
>WENV183607855
OODP01000053
414426
Bacteroidota
CTG
Gln
>WENV183607867
OODP01000076
16224
Bacteroidota
GGA
Ser
>WENV183607830
OODP01000025
16220
Bacteroidota
GGA
Ser
>WENV183607836
OODP01000034
338125
Bacteroidota
CCT
Arg
>WENV183608213
OODP01002169
338125
Bacteroidota
CCT
Arg
>WENV183607965
OODP01000255
235129
Bacteroidota
GCC
Gly
>WENV183608103
OODP01000882
411629
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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