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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
9 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183617782
OOEG01099531
10665
Alphaproteobacteria
GCT
Ser
>WENV183617710
OOEG01057740
339846
Alphaproteobacteria
GAC
Val
>WENV183617593
OOEG01012503
147334
Alphaproteobacteria
CAT
Met
>WENV183617768
OOEG01093992
192195
Alphaproteobacteria
GTC
Asp
>WENV183617594
OOEG01012858
340106
Alphaproteobacteria
GCC
Gly
>WENV183617679
OOEG01041425
148083
Alphaproteobacteria
ACG
Arg
>WENV183617627
OOEG01023505
412477
Alphaproteobacteria
GCA
Cys
>WENV183617846
OOEG01153426
338287
Alphaproteobacteria
GGT
Thr
>WENV183617573
OOEG01009849
377327
Alphaproteobacteria
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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