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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183619347
OOFQ01001827
245770
Gammaproteobacteria
TTT
Lys
>WENV183619710
OOFQ01035814
245770
Gammaproteobacteria
TTT
Lys
>WENV183619363
OOFQ01002175
17426
Gammaproteobacteria
GCT
Ser
>WENV183619312
OOFQ01000890
149578
Gammaproteobacteria
ACG
Arg
>WENV183619613
OOFQ01024107
236366
Gammaproteobacteria
GTG
His
>WENV183619492
OOFQ01010039
237980
Gammaproteobacteria
GAA
Phe
>WENV183619249
OOFQ01000186
45345
Gammaproteobacteria
GGA
Ser
>WENV183619227
OOFQ01000076
239650
Gammaproteobacteria
TGT
Thr
>WENV183619358
OOFQ01002052
238307
Gammaproteobacteria
GAA
Phe
>WENV183619352
OOFQ01001897
412476
Gammaproteobacteria
TCC
Gly
>WENV183619556
OOFQ01016915
145713
Gammaproteobacteria
CAT
Met
>WENV183619489
OOFQ01009890
411842
Gammaproteobacteria
GCA
Cys
>WENV183619338
OOFQ01001547
250885
Gammaproteobacteria
TGC
Ala
>WENV183619433
OOFQ01005866
243485
Gammaproteobacteria
TGT
Thr
>WENV183619244
OOFQ01000140
149661
Gammaproteobacteria
CAT
Met
>WENV183619350
OOFQ01001897
237421
Gammaproteobacteria
TGT
Thr
>WENV183619570
OOFQ01018059
237421
Gammaproteobacteria
TGT
Thr
>WENV183619840
OOFQ01060455
237421
Gammaproteobacteria
TGT
Thr
>WENV183619420
OOFQ01004728
16840
Gammaproteobacteria
GGA
Ser
>WENV183619474
OOFQ01009106
16840
Gammaproteobacteria
GGA
Ser
>WENV183619296
OOFQ01000707
245151
Gammaproteobacteria
GTG
His
>WENV183619265
OOFQ01000325
240536
Gammaproteobacteria
TTT
Lys
>WENV183619311
OOFQ01000890
17379
Gammaproteobacteria
GCT
Ser
>WENV183619294
OOFQ01000707
157977
Gammaproteobacteria
TGG
Pro
>WENV183619334
OOFQ01001469
157977
Gammaproteobacteria
TGG
Pro
>WENV183619667
OOFQ01029469
157977
Gammaproteobacteria
TGG
Pro
>WENV183619737
OOFQ01040964
157977
Gammaproteobacteria
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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