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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183620674
OOFS01011239
308806
Bacteroidota
TCC
Gly
>WENV183620818
OOFS01045308
172532
Bacteroidota
GTC
Asp
>WENV183620682
OOFS01012727
243344
Bacteroidota
TCC
Gly
>WENV183620753
OOFS01027968
241347
Bacteroidota
TTG
Gln
>WENV183620593
OOFS01004137
127288
Bacteroidota
TGG
Pro
>WENV183620867
OOFS01067541
127288
Bacteroidota
TGG
Pro
>WENV183620576
OOFS01002747
412944
Bacteroidota
GCA
Cys
>WENV183620687
OOFS01014027
238764
Bacteroidota
>WENV183620628
OOFS01006922
341598
Bacteroidota
GCC
Gly
>WENV183620540
OOFS01001422
341187
Bacteroidota
TTG
Gln
>WENV183620639
OOFS01007558
341187
Bacteroidota
TTG
Gln
>WENV183620560
OOFS01001959
341421
Bacteroidota
CCA
Trp
>WENV183620686
OOFS01013813
145512
Bacteroidota
CAT
Met
>WENV183620590
OOFS01003812
191853
Bacteroidota
TCG
Arg
>WENV183620629
OOFS01006922
58832
Bacteroidota
TAA
Leu
>WENV183620673
OOFS01011239
101289
Bacteroidota
GTA
Tyr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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