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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183633701
OOIG01001946
95987
Bacteroidota
CAA
Leu
>WENV183634288
OOIG01014558
95987
Bacteroidota
CAA
Leu
>WENV183633463
OOIG01000658
339412
Bacteroidota
GGT
Thr
>WENV183634305
OOIG01015527
339412
Bacteroidota
GGT
Thr
>WENV183634292
OOIG01014783
243025
Bacteroidota
CAT
Met
>WENV183634709
OOIG01102107
338155
Bacteroidota
CTC
Glu
>WENV183634708
OOIG01102058
126965
Bacteroidota
GGG
Pro
>WENV183634177
OOIG01011346
153993
Bacteroidota
GAT
Ile
>WENV183634491
OOIG01036778
343138
Bacteroidota
CCT
Arg
>WENV183633206
OOIG01000153
394247
Bacteroidota
CTC
Glu
>WENV183633207
OOIG01000153
394247
Bacteroidota
CTC
Glu
>WENV183633208
OOIG01000153
394247
Bacteroidota
CTC
Glu
>WENV183633210
OOIG01000153
394247
Bacteroidota
CTC
Glu
>WENV183633709
OOIG01001976
413663
Bacteroidota
CTG
Gln
>WENV183633321
OOIG01000310
136244
Bacteroidota
TAC
Val
>WENV183633464
OOIG01000658
237797
Bacteroidota
CCA
Trp
>WENV183634184
OOIG01011485
237797
Bacteroidota
CCA
Trp
>WENV183633959
OOIG01004902
436206
Bacteroidota
TTG
Gln
>WENV183633616
OOIG01001317
412479
Bacteroidota
TTG
Gln
>WENV183633247
OOIG01000217
235203
Bacteroidota
TTT
Lys
>WENV183634482
OOIG01034800
238121
Bacteroidota
CTT
Lys
>WENV183634692
OOIG01096067
126641
Bacteroidota
TAC
Val
>WENV183634002
OOIG01005970
338132
Bacteroidota
GCA
Cys
>WENV183633310
OOIG01000295
37076
Bacteroidota
TAA
Leu
>WENV183633980
OOIG01005393
37076
Bacteroidota
TAA
Leu
>WENV183634140
OOIG01010221
235165
Bacteroidota
CCA
Trp
>WENV183633799
OOIG01002903
301449
Bacteroidota
CGG
Pro
>WENV183634204
OOIG01011818
144933
Bacteroidota
TCT
Arg
>WENV183633992
OOIG01005759
303954
Bacteroidota
GCC
Gly
>WENV183634463
OOIG01031120
143169
Bacteroidota
GGG
Pro
>WENV183634222
OOIG01012300
144596
Bacteroidota
GGC
Ala
>WENV183633659
OOIG01001678
80607
Bacteroidota
GTA
Tyr
>WENV183634153
OOIG01010668
412235
Bacteroidota
>WENV183634584
OOIG01058104
80614
Bacteroidota
>WENV183633313
OOIG01000301
154643
Bacteroidota
CAT
Met
>WENV183633633
OOIG01001438
144639
Bacteroidota
GGC
Ala
>WENV183633710
OOIG01001984
263771
Bacteroidota
CTT
Lys
>WENV183634684
OOIG01091974
95875
Bacteroidota
TAG
Leu
>WENV183634664
OOIG01083800
338314
Bacteroidota
CCT
Arg
>WENV183633435
OOIG01000586
44852
Bacteroidota
TAA
Leu
>WENV183634343
OOIG01018257
280513
Bacteroidota
TTT
Lys
>WENV183633851
OOIG01003320
150485
Bacteroidota
GTT
Asn
>WENV183634304
OOIG01015527
95986
Bacteroidota
GTA
Tyr
>WENV183634680
OOIG01090123
338165
Bacteroidota
GGT
Thr
>WENV183634175
OOIG01011287
425638
Bacteroidota
CTG
Gln
>WENV183633479
OOIG01000738
94703
Bacteroidota
GTA
Tyr
>WENV183633115
OOIG01000066
353927
Bacteroidota
TTC
Glu
>WENV183633475
OOIG01000721
414426
Bacteroidota
CTG
Gln
>WENV183634074
OOIG01008088
56823
Bacteroidota
TGA
Ser
>WENV183634453
OOIG01028996
56823
Bacteroidota
TGA
Ser
>WENV183633432
OOIG01000569
151960
Bacteroidota
GGC
Ala
>WENV183634360
OOIG01019438
127023
Bacteroidota
GGG
Pro
>WENV183633431
OOIG01000567
338125
Bacteroidota
CCT
Arg
>WENV183633457
OOIG01000657
313363
Bacteroidota
GAA
Phe
>WENV183633496
OOIG01000786
313363
Bacteroidota
GAA
Phe
>WENV183633501
OOIG01000792
313363
Bacteroidota
GAA
Phe
>WENV183633641
OOIG01001522
313363
Bacteroidota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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