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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
|
BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
110 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183638632
OQVI01000248
144612
Bacillota
TCT
Arg
>WENV183638803
OQVI01000874
144612
Bacillota
TCT
Arg
>WENV183639140
OQVI01004542
144612
Bacillota
TCT
Arg
>WENV183639394
OQVI01011710
144612
Bacillota
TCT
Arg
>WENV183639089
OQVI01003697
267649
Bacillota
TAC
Val
>WENV183639374
OQVI01010993
267649
Bacillota
TAC
Val
>WENV183638712
OQVI01000462
235098
Bacillota
GAC
Val
>WENV183638746
OQVI01000586
235098
Bacillota
GAC
Val
>WENV183639008
OQVI01002590
235098
Bacillota
GAC
Val
>WENV183639105
OQVI01003925
235098
Bacillota
GAC
Val
>WENV183639252
OQVI01006728
338152
Bacillota
TTC
Glu
>WENV183639178
OQVI01005076
148239
Bacillota
TCT
Arg
>WENV183638944
OQVI01002025
44854
Bacillota
TGA
Ser
>WENV183639095
OQVI01003751
44854
Bacillota
TGA
Ser
>WENV183639402
OQVI01011938
347827
Bacillota
TTC
Glu
>WENV183638707
OQVI01000443
59312
Bacillota
CAG
Leu
>WENV183638674
OQVI01000318
245370
Bacillota
TGT
Thr
>WENV183638582
OQVI01000139
338147
Bacillota
CTC
Glu
>WENV183638583
OQVI01000139
338147
Bacillota
CTC
Glu
>WENV183639672
OQVI01035319
235294
Bacillota
TGC
Ala
>WENV183638879
OQVI01001347
182792
Bacillota
GTC
Asp
>WENV183639486
OQVI01016245
44859
Bacillota
AAG
Leu
>WENV183639555
OQVI01021185
268272
Bacillota
TGC
Ala
>WENV183638937
OQVI01001947
11034
Bacillota
GGA
Ser
>WENV183639042
OQVI01003028
11034
Bacillota
GGA
Ser
>WENV183639179
OQVI01005076
156937
Bacillota
GTG
His
>WENV183638853
OQVI01001183
274189
Bacillota
TGT
Thr
>WENV183639250
OQVI01006546
235079
Bacillota
GAA
Phe
>WENV183638580
OQVI01000136
16266
Bacillota
GCT
Ser
>WENV183639579
OQVI01023181
173314
Bacillota
GAT
Ile
>WENV183638815
OQVI01000949
338149
Bacillota
CTC
Glu
>WENV183639145
OQVI01004607
338149
Bacillota
CTC
Glu
>WENV183639164
OQVI01004935
338149
Bacillota
CTC
Glu
>WENV183639384
OQVI01011286
338149
Bacillota
CTC
Glu
>WENV183638741
OQVI01000569
245298
Bacillota
CGG
Pro
>WENV183639222
OQVI01005913
245298
Bacillota
CGG
Pro
>WENV183639256
OQVI01006771
245298
Bacillota
CGG
Pro
>WENV183639465
OQVI01015587
245298
Bacillota
CGG
Pro
>WENV183639230
OQVI01006118
37269
Bacillota
TGA
Ser
>WENV183639382
OQVI01011148
155089
Bacillota
CAT
Met
>WENV183639609
OQVI01026711
287000
Bacillota
GTT
Asn
>WENV183639318
OQVI01008836
152492
Bacillota
GGG
Pro
>WENV183638968
OQVI01002185
235078
Bacillota
TAC
Val
>WENV183638598
OQVI01000165
100326
Bacillota
GTA
Tyr
>WENV183638693
OQVI01000369
100326
Bacillota
GTA
Tyr
>WENV183639492
OQVI01016861
100326
Bacillota
GTA
Tyr
>WENV183638969
OQVI01002185
240017
Bacillota
GCC
Gly
>WENV183639464
OQVI01015587
411547
Bacillota
CTG
Gln
>WENV183639599
OQVI01024815
411547
Bacillota
CTG
Gln
>WENV183638488
OQVI01000034
411547
Bacillota
CTG
Gln
>WENV183638574
OQVI01000124
411547
Bacillota
CTG
Gln
>WENV183638740
OQVI01000569
411547
Bacillota
CTG
Gln
>WENV183639221
OQVI01005913
411547
Bacillota
CTG
Gln
>WENV183639255
OQVI01006771
411547
Bacillota
CTG
Gln
>WENV183639359
OQVI01010580
411547
Bacillota
CTG
Gln
>WENV183638977
OQVI01002268
147684
Bacillota
ACG
Arg
>WENV183639075
OQVI01003571
147684
Bacillota
ACG
Arg
>WENV183638945
OQVI01002025
4624
Bacillota
GCT
Ser
>WENV183639096
OQVI01003751
4624
Bacillota
GCT
Ser
>WENV183638797
OQVI01000841
263765
Bacillota
TAC
Val
>WENV183639519
OQVI01019076
263765
Bacillota
TAC
Val
>WENV183639461
OQVI01015368
412387
Bacillota
GCA
Cys
>WENV183638771
OQVI01000726
18852
Bacillota
GCT
Ser
>WENV183638498
OQVI01000045
235095
Bacillota
GGT
Thr
>WENV183638880
OQVI01001347
235095
Bacillota
GGT
Thr
>WENV183638533
OQVI01000094
419945
Bacillota
GCA
Cys
>WENV183638744
OQVI01000583
185292
Bacillota
ACG
Arg
>WENV183639520
OQVI01019076
154748
Bacillota
GTC
Asp
>WENV183638708
OQVI01000448
411549
Bacillota
TTG
Gln
>WENV183638742
OQVI01000569
411549
Bacillota
TTG
Gln
>WENV183638739
OQVI01000553
148188
Bacillota
CCG
Arg
>WENV183638883
OQVI01001353
148188
Bacillota
CCG
Arg
>WENV183639190
OQVI01005273
148188
Bacillota
CCG
Arg
>WENV183639198
OQVI01005424
148188
Bacillota
CCG
Arg
>WENV183639022
OQVI01002667
80612
Bacillota
GTA
Tyr
>WENV183638496
OQVI01000042
235127
Bacillota
TTT
Lys
>WENV183638877
OQVI01001347
235124
Bacillota
TGG
Pro
>WENV183639070
OQVI01003515
235124
Bacillota
TGG
Pro
>WENV183638775
OQVI01000738
338129
Bacillota
TGT
Thr
>WENV183639196
OQVI01005384
338129
Bacillota
TGT
Thr
>WENV183639554
OQVI01021167
149274
Bacillota
>WENV183638680
OQVI01000327
144583
Bacillota
ACG
Arg
>WENV183638860
OQVI01001252
144583
Bacillota
ACG
Arg
>WENV183638878
OQVI01001347
235171
Bacillota
CCA
Trp
>WENV183638695
OQVI01000369
238974
Bacillota
GAA
Phe
>WENV183638816
OQVI01000949
144621
Bacillota
GTT
Asn
>WENV183639134
OQVI01004465
144621
Bacillota
GTT
Asn
>WENV183639146
OQVI01004607
144621
Bacillota
GTT
Asn
>WENV183639165
OQVI01004935
144621
Bacillota
GTT
Asn
>WENV183639385
OQVI01011286
144621
Bacillota
GTT
Asn
>WENV183638677
OQVI01000318
243098
Bacillota
GGT
Thr
>WENV183638842
OQVI01001079
58712
Bacillota
CAG
Leu
>WENV183638888
OQVI01001440
58712
Bacillota
CAG
Leu
>WENV183638628
OQVI01000230
245296
Bacillota
CCC
Gly
>WENV183638725
OQVI01000493
245296
Bacillota
CCC
Gly
>WENV183639442
OQVI01013893
245296
Bacillota
CCC
Gly
>WENV183638532
OQVI01000094
344240
Bacillota
GCC
Gly
>WENV183639503
OQVI01018010
152497
Bacillota
GTC
Asp
>WENV183638794
OQVI01000821
178024
Bacillota
TCT
Arg
>WENV183638634
OQVI01000248
144594
Bacillota
CAC
Val
>WENV183638766
OQVI01000707
144594
Bacillota
CAC
Val
>WENV183638920
OQVI01001734
414486
Bacillota
CCC
Gly
>WENV183638829
OQVI01001010
272488
Bacillota
GAA
Phe
>WENV183638821
OQVI01000976
114075
Bacillota
TAG
Leu
>WENV183639034
OQVI01002915
238945
Bacillota
GCC
Gly
>WENV183639282
OQVI01007645
238945
Bacillota
GCC
Gly
>WENV183639144
OQVI01004568
338128
Bacillota
TTC
Glu
>WENV183639343
OQVI01009812
338128
Bacillota
TTC
Glu
>WENV183638531
OQVI01000094
245344
Bacillota
GAA
Phe
>WENV183639013
OQVI01002600
245344
Bacillota
GAA
Phe
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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